Non-Coding RNA Search

Ss1.1-rtes38_b18.5

Sequence:


               
               AAGTTACCTGGTCTTTGAATTTAGAATTAAAAAAAAAAAGTGGCACGTTGCATGTTAGGT
TTTAAAAGATTAATATCAGAAGTTATGGAGTTTTAATAGTTTTGGAGAAAGTTTTGGTTT
CTACAGAGCAAAATAATATGCAGCAGCTTTACTGCTATTAGAAAAATCAGCTATTGGAAT
TTCCTCTTAAATAGTTTGACTACAGTATAACTGGTAGTTTTGTAATATAAATGAGAGTGT
GTTCTGTTGCACAGAGCTAAATGCAATAAAGTTTCTGAACGGTTGTTTGATTCTATCAAC
AATTGAAAGTGTTGTATGTGGCCTACATTTACCTAGTTTGTGTCAAATTATAGTTATGAT
CCTTTGTTCACTTAAATTATAGGAGCCTTTAAAAAGGTGCTTTGTTGACAGACAACTCAG
CAAAACAGAAATGTCTATGTGTCATTCATAGAATCACTGGTTAATAGTGTAGCATATTTA
CATTTGAAAACAGAGATAAGAGGTTTATCAAAACAAAATGGTGTACATATTTTTTTTTAA
GCTGTTATAGTTGTTATGCCAGAATGGCTGACCCTCACAAGATTGCTTATGCTGACATTG
CTCTTGAAAATAAAATTTAAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTTACCTGGTCTTTGAATTTAGAATTAAAAAAAAAAAGTGGCACGTTGCATGTTAGGT
TTTAAAAGATTAATATCAGAAGTTATGGAGTTTTAATAGTTTTGGAGAAAGTTTTGGTTT
CTACAGAGCAAAATAATATGCAGCAGCTTTACTGCTATTAGAAAAATCAGCTATTGGAAT
TTCCTCTTAAATAGTTTGACTACAGTATAACTGGTAGTTTTGTAATATAAATGAGAGTGT
GTTCTGTTGCACAGAGCTAAATGCAATAAAGTTTCTGAACGGTTGTTTGATTCTATCAAC
AATTGAAAGTGTTGTATGTGGCCTACATTTACCTAGTTTGTGTCAAATTATAGTTATGAT
CCTTTGTTCACTTAAATTATAGGAGCCTTTAAAAAGGTGCTTTGTTGACAGACAACTCAG
CAAAACAGAAATGTCTATGTGTCATTCATAGAATCACTGGTTAATAGTGTAGCATATTTA
CATTTGAAAACAGAGATAAGAGGTTTATCAAAACAAAATGGTGTACATATTTTTTTTTAA
GCTGTTATAGTTGTTATGCCAGAATGGCTGACCCTCACAAGATTGCTTATGCTGACATTG
CTCTTGAAAATAAAATTTAAAATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-620, gnl|bosTau2|chr17 (11725939-11726545)
               

               
               1-620, gnl|Hg17|chr4 (141667809-141667230)
               

               
               1-620, gnl|Mm7|chr8 (82005254-82005846)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-620, gnl|bosTau2|chr17 (11725939-11726545)
               

               
               1-620, gnl|Hg17|chr4 (141667809-141667230)
               

               
               1-620, gnl|Mm7|chr8 (82005254-82005846)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tes (0.415628)
               

               
               cte (0.29274)
               

               
               fco (0.157208)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.415628)
               

               
               cte (0.29274)
               

               
               fco (0.157208)

	1-620, gnl\|bosTau2\|chr17 (11725939-11726545)
	1-620, gnl\|Hg17\|chr4 (141667809-141667230)
	1-620, gnl\|Mm7\|chr8 (82005254-82005846)