Non-Coding RNA Search

Ss1.1-rthg01_i13.5

Sequence:


               
               TGCTAATATGCCACACCCTAATTTTTTGGTAACAATTTATGAAAGTTAAGTTGTGACTTA
AGGCCTGTTACAGCAGTCAAAAGGTAAGGTACCTTTATTCAAGGGGGCCTTTCCTGTAAA
CTACAGTTTTTTTGTCAATAAATTTCAGTTTTTAGGTTTTTGTGCTGTAGGAAAATGACC
TTGTCGGTTTAGCCATTGCTGCATTGCACCATTTTACATACAAGGCAAATTTTTTCTTTG
AAGAATCTAGGATACCCAAACTTGTAACTGAAGGCCATAGAGGAGCCTTGTGGTAGTAAA
TTATAGTAAATAGACATTTGAGAAAGTTATATGAATGAAAAAATGTACATTTTAAAATGA
AATTGCAAAAAGTACCCTTTGACTGATGCCTCTCAGTTTACATTTTTATTTGACTCTCTA
TTTCTTTTGATACTCTTGACATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTAATATGCCACACCCTAATTTTTTGGTAACAATTTATGAAAGTTAAGTTGTGACTTA
AGGCCTGTTACAGCAGTCAAAAGGTAAGGTACCTTTATTCAAGGGGGCCTTTCCTGTAAA
CTACAGTTTTTTTGTCAATAAATTTCAGTTTTTAGGTTTTTGTGCTGTAGGAAAATGACC
TTGTCGGTTTAGCCATTGCTGCATTGCACCATTTTACATACAAGGCAAATTTTTTCTTTG
AAGAATCTAGGATACCCAAACTTGTAACTGAAGGCCATAGAGGAGCCTTGTGGTAGTAAA
TTATAGTAAATAGACATTTGAGAAAGTTATATGAATGAAAAAATGTACATTTTAAAATGA
AATTGCAAAAAGTACCCTTTGACTGATGCCTCTCAGTTTACATTTTTATTTGACTCTCTA
TTTCTTTTGATACTCTTGACATTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-444, gnl|bosTau2|chr21 (8023094-8023537)
               

               
               1-444, gnl|Hg17|chr15 (91245683-91246126)
               

               
               1-444, gnl|Mm7|chr7 (69393375-69392938)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-444, gnl|bosTau2|chr21 (8023094-8023537)
               

               
               1-444, gnl|Hg17|chr15 (91245683-91246126)
               

               
               1-444, gnl|Mm7|chr7 (69393375-69392938)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.146284)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               thg (0.126791)

	1-444, gnl\|bosTau2\|chr21 (8023094-8023537)
	1-444, gnl\|Hg17\|chr15 (91245683-91246126)
	1-444, gnl\|Mm7\|chr7 (69393375-69392938)