Non-Coding RNA Search

Ss1.1-rthg02_o22.5

Sequence:


               
               TCCATGAAGAGAGGAATTGTGTATGTCTTACTCACCATTATATCCTAATACAGTGCCTAT
TACTCAGTAAATATTGTTGAATAGATGAATGAAAAGTGACTAATGGAAAGGAAAAAAACT
TCAAAATAATAGCTGCCATTTATTGGATGTCTGTTAAGTGACTGGGCCTTTATACAAGTT
AATATTTAATCCTTGCAACAATCCAGATGGAGCAATTGAGTTCAGAGAACTTAACTTGGT
CAAAGTGATACTTCTGAGATTTGAACCAGGATCTCTCTAGATCCAAAGTCTGTCCTTTCC
ACCTAGTAATATGGCCCCTCTCAGGCCTTATATTTGTATAAGCTGTTACAGGCTACATTT
TTACTTCTTAGGACACCCTTGTGAAGTTAATGTTATTTTCCATTTTATATCTAGTGAGTG
GCCAAGTCATGATTTTCAAATTTGATGGTCTAGATCCAGGTTCATTCCCTTTCTGTAATA
ACACAGCTGTCTCATTATGGCGGATTCAGAGATGTAAGGCATTTACCAAAATGGAGAGAT
AATAAAAGTTTAAAAAATGATAAGGTGTTTTTGTTTCAAAAACAATAGAAAAAATTTTAG
GCAGATGTATTTTAGCAGGGCTGGAATAAATTCTATGTTTTCTTTGTCATTTTTTCCAAG
AAGGGGAAAATCGAATAAAATTGGGAATGATTGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCATGAAGAGAGGAATTGTGTATGTCTTACTCACCATTATATCCTAATACAGTGCCTAT
TACTCAGTAAATATTGTTGAATAGATGAATGAAAAGTGACTAATGGAAAGGAAAAAAACT
TCAAAATAATAGCTGCCATTTATTGGATGTCTGTTAAGTGACTGGGCCTTTATACAAGTT
AATATTTAATCCTTGCAACAATCCAGATGGAGCAATTGAGTTCAGAGAACTTAACTTGGT
CAAAGTGATACTTCTGAGATTTGAACCAGGATCTCTCTAGATCCAAAGTCTGTCCTTTCC
ACCTAGTAATATGGCCCCTCTCAGGCCTTATATTTGTATAAGCTGTTACAGGCTACATTT
TTACTTCTTAGGACACCCTTGTGAAGTTAATGTTATTTTCCATTTTATATCTAGTGAGTG
GCCAAGTCATGATTTTCAAATTTGATGGTCTAGATCCAGGTTCATTCCCTTTCTGTAATA
ACACAGCTGTCTCATTATGGCGGATTCAGAGATGTAAGGCATTTACCAAAATGGAGAGAT
AATAAAAGTTTAAAAAATGATAAGGTGTTTTTGTTTCAAAAACAATAGAAAAAATTTTAG
GCAGATGTATTTTAGCAGGGCTGGAATAAATTCTATGTTTTCTTTGTCATTTTTTCCAAG
AAGGGGAAAATCGAATAAAATTGGGAATGATTGCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-695, gnl|bosTau2|chr6 (48686323-48687008)
               

               
               1-695, gnl|Hg17|chr4 (72296696-72297411)
               

               
               1-695, gnl|Mm7|chr5 (88735946-88736615)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-695, gnl|bosTau2|chr6 (48686323-48687008)
               

               
               1-695, gnl|Hg17|chr4 (72296696-72297411)
               

               
               1-695, gnl|Mm7|chr5 (88735946-88736615)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               thg (0.126791)

	1-695, gnl\|bosTau2\|chr6 (48686323-48687008)
	1-695, gnl\|Hg17\|chr4 (72296696-72297411)
	1-695, gnl\|Mm7\|chr5 (88735946-88736615)