Non-Coding RNA Search

Ss1.1-rthg04_n20.5

Sequence:


               
               CGAGGCCTGTGGTTCCCTGCGACCTCGTTTATGGAGGGCTGTAAAGTCTAGCGGCGATAC
ATCATCCTGATAGGCCCGCGTTTCACCAAGAAAAAAGTCAGATGAAATTCCAGCAGGTCA
AAGAATCCTGTCTTATCTATGAAATGCAGTTAACAGAGCAACTGGACCTGTTTCCTGAGT
ACAGGGTGACCCTTCTGTTATTTAAAGATGTGAAAAATGCTGGAGCCTTGAGAAAAAAGG
CCATGGAAGGTGGCATGGACGGCTCATTAATCAACCCTACAGTGATGGTCGATCCATTTC
AGATACTTGTGGCAGCAAACAAAGCAGTTCACCTCTACAAACGGGGGAAAATGAAGACAA
GAACTCTATCTACGGAAATTATTTTCAATCTTTCCCCAAATAATAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGGCCTGTGGTTCCCTGCGACCTCGTTTATGGAGGGCTGTAAAGTCTAGCGGCGATAC
ATCATCCTGATAGGCCCGCGTTTCACCAAGAAAAAAGTCAGATGAAATTCCAGCAGGTCA
AAGAATCCTGTCTTATCTATGAAATGCAGTTAACAGAGCAACTGGACCTGTTTCCTGAGT
ACAGGGTGACCCTTCTGTTATTTAAAGATGTGAAAAATGCTGGAGCCTTGAGAAAAAAGG
CCATGGAAGGTGGCATGGACGGCTCATTAATCAACCCTACAGTGATGGTCGATCCATTTC
AGATACTTGTGGCAGCAAACAAAGCAGTTCACCTCTACAAACGGGGGAAAATGAAGACAA
GAACTCTATCTACGGAAATTATTTTCAATCTTTCCCCAAATAATAATA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|58568375|gb|AAW78986.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|58568375|gb|AAW78986.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               122-284, gnl|bosTau2|chr11 (11478056-11477895)
               

               
               122-284, gnl|Hg17|chr2 (73873372-73873211)
               

               
               122-284, gnl|Mm7|chr6 (85999447-85999608)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               122-284, gnl|bosTau2|chr11 (11478056-11477895)
               

               
               122-284, gnl|Hg17|chr2 (73873372-73873211)
               

               
               122-284, gnl|Mm7|chr6 (85999447-85999608)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               hea (0.204499)
               

               
               eye (0.170503)
               

               
               tbr (0.154178)
               

               
               che (0.136314)
               

               
               cbr (0.127975)
               

               
               thg (0.126791)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               eye (0.170503)
               

               
               tbr (0.154178)
               

               
               che (0.136314)
               

               
               cbr (0.127975)
               

               
               thg (0.126791)

	122-284, gnl\|bosTau2\|chr11 (11478056-11477895)
	122-284, gnl\|Hg17\|chr2 (73873372-73873211)
	122-284, gnl\|Mm7\|chr6 (85999447-85999608)

	hea (0.204499)
	eye (0.170503)
	tbr (0.154178)
	che (0.136314)
	cbr (0.127975)
	thg (0.126791)