Non-Coding RNA Search

Ss1.1-rthg05_m17.5

Sequence:


               
               GAGAGATCTGTGTGACATTGATGCTGTTGCATGGGGTCTCATGAATCTTCTGCTCTAGTT
TATATTATGTGGAACAAATGACTCTTCTTTGCCACCACTTTGCCTTAGATAACTGTGTGT
GTGCCAGTGTGGACTCTGACACCACCTTTCCTTCTATGCAATCATGCCCTATCTGATAAT
GTTGCCTTGCTTTGCTGTGTGCTTCAGCGGGTCCCAGTTGCACCTTGGCCTTTCTGTGTT
GTTCAATTTGCTGTCATAGCAGTTACCCTTATTGTAATTTATATAACTTTAAAGAGGATC
ACACTGTTCCCCTGCCTTACTTAGTTGCTTAGTTGAACACAGAACAGAGGCAATATAAAA
TTCTGAGTTCATGCACAAGCTGGGATGAGAAGGGGAATGAGCCATATAATGTGGAAAATT
ATAGTTTGCGGGTATAATTATATAGTGCTTTTTTCCCTCAAAGTATTTTTCTAGCCTTGA
ATTCATTTTATCTTCATTATCCCTGTGAAGTAGGTAGGCAAGTATGAGGGGAGGTTGGGT
GCTGAGTTTTTAGGCCAAAGACTGATATGAATACAAATTATTTGCTAACTGTAGAACCTT
GGGCCCATCAGTTAATTGCTCTGAGATTCACTTTCCTCATCTGTTAAATAAGAATAATAT
CTGTGCTGCCTACCTCACAGGGTTGTTGTGAGGGTCAAATGGAATGTATGTGTAAGATTT
GTAAATGGTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAGATCTGTGTGACATTGATGCTGTTGCATGGGGTCTCATGAATCTTCTGCTCTAGTT
TATATTATGTGGAACAAATGACTCTTCTTTGCCACCACTTTGCCTTAGATAACTGTGTGT
GTGCCAGTGTGGACTCTGACACCACCTTTCCTTCTATGCAATCATGCCCTATCTGATAAT
GTTGCCTTGCTTTGCTGTGTGCTTCAGCGGGTCCCAGTTGCACCTTGGCCTTTCTGTGTT
GTTCAATTTGCTGTCATAGCAGTTACCCTTATTGTAATTTATATAACTTTAAAGAGGATC
ACACTGTTCCCCTGCCTTACTTAGTTGCTTAGTTGAACACAGAACAGAGGCAATATAAAA
TTCTGAGTTCATGCACAAGCTGGGATGAGAAGGGGAATGAGCCATATAATGTGGAAAATT
ATAGTTTGCGGGTATAATTATATAGTGCTTTTTTCCCTCAAAGTATTTTTCTAGCCTTGA
ATTCATTTTATCTTCATTATCCCTGTGAAGTAGGTAGGCAAGTATGAGGGGAGGTTGGGT
GCTGAGTTTTTAGGCCAAAGACTGATATGAATACAAATTATTTGCTAACTGTAGAACCTT
GGGCCCATCAGTTAATTGCTCTGAGATTCACTTTCCTCATCTGTTAAATAAGAATAATAT
CTGTGCTGCCTACCTCACAGGGTTGTTGTGAGGGTCAAATGGAATGTATGTGTAAGATTT
GTAAATGGTAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-732, gnl|bosTau2|chr3 (73369560-73368836)
               

               
               1-732, gnl|Hg17|chr1 (38999020-38998278)
               

               
               1-732, gnl|Mm7|chr4 (123356186-123356899)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-732, gnl|bosTau2|chr3 (73369560-73368836)
               

               
               1-732, gnl|Hg17|chr1 (38999020-38998278)
               

               
               1-732, gnl|Mm7|chr4 (123356186-123356899)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fat (0.147427)
               

               
               thg (0.126791)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               thg (0.126791)
               

               
               pgl (0.118483)

	1-732, gnl\|bosTau2\|chr3 (73369560-73368836)
	1-732, gnl\|Hg17\|chr1 (38999020-38998278)
	1-732, gnl\|Mm7\|chr4 (123356186-123356899)