Ss1.1-rthg07_j4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTAAGTGAATCCTGTTACAGAAAGAAGTACGTGTGAGTGATTAAATATGTCATCTCAAG GGGAAGACTCAGACTATGGCATTCTTTTTGGTACTGCACAGGAGGGTTTGTCCCTAAAGC AGTGGTTCTCAAACTTACACAAGCATCAGAAATTAT------------------------ ------------------------------------------------------------ ------------------------------------------------TGAGAACCCTTA GTCTAAAACATAAAACTTTTTGTCAGAATGTAAGGTTTGCATAATTGATGGTTCATAATC TGAAGTATTAAAGAGTACTATAAAATTTTGAAATGGACCTCAGAATAAATTTTAATTTAC TTTTATTTAAATATTATTTTAAAAACATAGCATCTTAAGAGATGAGAGGTGTTCCCTTGT GGCTCAGTGAGTTAAGGATCCGGAATTATAACTGCTGTGATTTGGGTCACTGTTGTGCTT CAGATTCCATCTCTGGCCTGTGAACTTCCACAAGCATTGCCAAAGAGAAAAGAAAAAAAA GATGAGGATTGCAAATTCTACCCGAGTTAGGAGCCTCTTTTTTGGATGTTTATAGAGGGA TGCAGTTTCTCTCATGAGGATGTGCTCTAAGAGTCTCCAGTGTAGGATCTAAAATCCATG GAGATGGAATAATCCTAAATTAACAAGATGGGGTATGCTAAGGATCAAGAAAAACTTTAA AATAAAAATTGGTGTGTACTAGTTATTAAAACTGCAAACACAGAAACATGTAGATAAAAG GTCTGTGACAGCCTTACTCATGATTGCCCCCAAATGGAAACAACCCAAATGTGTTTCACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTAAGTGAATCCTGTTACAGAAAGAAGTACGTGTGAGTGATTAAATATGTCATCTCAAG GGGAAGACTCAGACTATGGCATTCTTTTTGGTACTGCACAGGAGGGTTTGTCCCTAAAGC AGTGGTTCTCAAACTTACACAAGCATCAGAAATTAT------------------------ ------------------------------------------------------------ ------------------------------------------------TGAGAACCCTTA GTCTAAAACATAAAACTTTTTGTCAGAATGTAAGGTTTGCATAATTGATGGTTCATAATC TGAAGTATTAAAGAGTACTATAAAATTTTGAAATGGACCTCAGAATAAATTTTAATTTAC TTTTATTTAAATATTATTTTAAAAACATAGCATCTTAAGAGATGAGAGGTGTTCCCTTGT GGCTCAGTGAGTTAAGGATCCGGAATTATAACTGCTGTGATTTGGGTCACTGTTGTGCTT CAGATTCCATCTCTGGCCTGTGAACTTCCACAAGCATTGCCAAAGAGAAAAGAAAAAAAA GATGAGGATTGCAAATTCTACCCGAGTTAGGAGCCTCTTTTTTGGATGTTTATAGAGGGA TGCAGTTTCTCTCATGAGGATGTGCTCTAAGAGTCTCCAGTGTAGGATCTAAAATCCATG GAGATGGAATAATCCTAAATTAACAAGATGGGGTATGCTAAGGATCAAGAAAAACTTTAA AATAAAAATTGGTGTGTACTAGTTATTAAAACTGCAAACACAGAAACATGTAGATAAAAG GTCTGTGACAGCCTTACTCATGATTGCCCCCAAATGGAAACAACCCAAATGTGTTTCACA |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-153, gnl|bosTau2|chr22 (6782232-6782388) | |
| 1-153, gnl|canFam2|chr23 (8747701-8748484) | |
| 1-153, gnl|dasNov1|scaffold_2029 (64357-65053) | |
| 1-153, gnl|echTel1|scaffold_61068 (959-1733) | |
| 1-153, gnl|hg17|chr3 (35671631-35672303) | |
| 1-153, gnl|Hg17|chr3 (35672174-35672321) | |
| 1-153, gnl|loxAfr1|scaffold_5293 (16126-15429) | |
| 1-153, gnl|mm7|chr9 (111917364-111916696) | |
| 1-153, gnl|Mm7|chr9 (111916824-111916676) | |
| 1-153, gnl|oryCun1|scaffold_209581 (84547-83862) | |
| 1-153, gnl|panTro1|chr2 (36688975-36689648) | |
| 1-153, gnl|rheMac2|chr2 (178063500-178064172) | |
| 1-153, gnl|rn3|chr8 (116844514-116843820) | |
| 156-335, gnl|bosTau2|chr22 (6782533-6782709) | |
| 156-335, gnl|canFam2|chr23 (8748515-8748753) | |
| 156-335, gnl|dasNov1|scaffold_2029 (65084-65309) | |
| 156-335, gnl|echTel1|scaffold_61068 (1769-2002) | |
| 156-335, gnl|hg17|chr3 (35672333-35672555) | |
| 156-335, gnl|Hg17|chr3 (35672443-35672623) | |
| 156-335, gnl|oryCun1|scaffold_209581 (83835-83615) | |
| 156-335, gnl|panTro1|chr2 (36689678-36689900) | |
| 156-335, gnl|rheMac2|chr2 (178064202-178064426) | |
| 156-335, gnl|rn3|chr8 (116843790-116843555) | |
| 461-766, gnl|bosTau2|chr22 (6782700-6783013) | |
| 461-766, gnl|Hg17|chr3 (35672614-35672926) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-153, gnl|bosTau2|chr22 (6782232-6782388) | |
| 1-153, gnl|canFam2|chr23 (8747701-8748484) | |
| 1-153, gnl|dasNov1|scaffold_2029 (64357-65053) | |
| 1-153, gnl|echTel1|scaffold_61068 (959-1733) | |
| 1-153, gnl|hg17|chr3 (35671631-35672303) | |
| 1-153, gnl|Hg17|chr3 (35672174-35672321) | |
| 1-153, gnl|loxAfr1|scaffold_5293 (16126-15429) | |
| 1-153, gnl|mm7|chr9 (111917364-111916696) | |
| 1-153, gnl|Mm7|chr9 (111916824-111916676) | |
| 1-153, gnl|oryCun1|scaffold_209581 (84547-83862) | |
| 1-153, gnl|panTro1|chr2 (36688975-36689648) | |
| 1-153, gnl|rheMac2|chr2 (178063500-178064172) | |
| 1-153, gnl|rn3|chr8 (116844514-116843820) | |
| 156-335, gnl|bosTau2|chr22 (6782533-6782709) | |
| 156-335, gnl|canFam2|chr23 (8748515-8748753) | |
| 156-335, gnl|dasNov1|scaffold_2029 (65084-65309) | |
| 156-335, gnl|echTel1|scaffold_61068 (1769-2002) | |
| 156-335, gnl|hg17|chr3 (35672333-35672555) | |
| 156-335, gnl|Hg17|chr3 (35672443-35672623) | |
| 156-335, gnl|oryCun1|scaffold_209581 (83835-83615) | |
| 156-335, gnl|panTro1|chr2 (36689678-36689900) | |
| 156-335, gnl|rheMac2|chr2 (178064202-178064426) | |
| 156-335, gnl|rn3|chr8 (116843790-116843555) | |
| 461-766, gnl|bosTau2|chr22 (6782700-6783013) | |
| 461-766, gnl|Hg17|chr3 (35672614-35672926) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| thg (0.126791) |