Ss1.1-rthg09_m13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCCACCCCGAGCTGCTGCCCGAGCTCAGCTCCTTGCCCCCTGTCAACCCCTGAGAGTGG ACCACACACACCCCTCCCTACCCCAGGACGGCCACCAACTCGGCAGCCACCTCTGCCACT TGCTGCCCACAGCCCACACCTGGGGGTGCCACAGTCTCCTGTCCCTGCACCCCTCCACAC ATTCCTCAGCCAGAGATCCCCGCCAGGCCCTGGAGGTCTGACAGCCCCTCTCTCCCAGAG CTGGTTCCTCCCTGGGAGAGTGACTTCAGGGCTGGCCACCCCCCTGTTCCCCATCCTTAG CTGAAGTTTGATGAATTGAAATTGGGGCCCTATGCTAACTGGTTTCCTTTGTTCTCAATA AATGTTGGGTTTGTAATAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCCACCCCGAGCTGCTGCCCGAGCTCAGCTCCTTGCCCCCTGTCAACCCCTGAGAGTGG ACCACACACACCCCTCCCTACCCCAGGACGGCCACCAACTCGGCAGCCACCTCTGCCACT TGCTGCCCACAGCCCACACCTGGGGGTGCCACAGTCTCCTGTCCCTGCACCCCTCCACAC ATTCCTCAGCCAGAGATCCCCGCCAGGCCCTGGAGGTCTGACAGCCCCTCTCTCCCAGAG CTGGTTCCTCCCTGGGAGAGTGACTTCAGGGCTGGCCACCCCCCTGTTCCCCATCCTTAG CTGAAGTTTGATGAATTGAAATTGGGGCCCTATGCTAACTGGTTTCCTTTGTTCTCAATA AATGTTGGGTTTGTAATAAAAAAA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 1-120, - strand, RNAz p=0.605754 | |
| 160-282, - strand, RNAz p=0.955485 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-120, - strand, RNAz p=0.605754 | |
| 160-282, - strand, RNAz p=0.955485 |
| Aligned organism(s): 2 entry(ies) | More info |
| Aligned organism(s): 2 entry(ies) | Help | Less info |
| 1-282, gnl|bosTau2|chr23 (23480772-23480492) | |
| 1-282, gnl|Hg17|chr6 (31955893-31955616) |
| Aligned organism(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-282, gnl|bosTau2|chr23 (23480772-23480492) | |
| 1-282, gnl|Hg17|chr6 (31955893-31955616) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| thg (0.126791) | |
| nbm (0.0993246) |