Non-Coding RNA Search

Ss1.1-rthg14_d21.5

Sequence:


               
               GTAGCATAATGTATAGTTCCATGTGTTTGTGCTTTTCGCATTTTTCTTCCTATATTTGAC
TTCTAGTTTCATACTGTTGTGGCTGGGGAAAATGCTTGACATAATTTCTAGTGTCTTAAA
TTTGTTAAGACTTGTTTTGTGACCTAGCATGTGATCTATTCTAGAGAATGTTTCATGTGC
ACTTGAAGAGAATGTGTATTCTGCTGTTTGGGGATGGAATGTGCTGCAGATACCTATTAA
GTTCAACTGGTCTGTTATATCACTTAAGACCACCGTTGCCTTATTTTCTGTCTGTAAGTG
GGGTATTAAATTCCCTTACCAATATTATATTATTGCCACATTTTCTCTTTTTGACTATTT
GCTTTAGATATCTGTATTGAGAGCATGTGTGTTAATGAGTGTAATATCCTTTTTGTATTG
TCTCTGTCAATACATAATACCCTTCTGTTATAGCCTTTGTTTTAAATTCTATTTTATCTG
AGTATTGTTACCACCACTTTCTTGCCATTTCTGTTTGCATGAAATATCTTTTTTTCATCC
TCTCACTTCCCACTTGTTAGTATTTAGTTCTAAAGTGAGTCACTAGTAGAGAGCCGAAAG
TCTTATTTTTAGTTTTTAATCCAGTCACCTTGTTTTGTTTGGAGCACTTAGTCTTTTGAC
ATTTAAGGTAATAATTGCTAGGTATTTACTTAATTGCCATTTTATTACTTGTTTTCTGGT
TGTTTTTATAGTCCTTCCCTGTTCTGTTCTTTTTAAATTTTCTCTGTGGTATGATGATTT
TCTTTAGTGGTATGTTTCTGATTTTTTCTCTCATTTTTGTGTAATTATTGTAAGTTTTTG
ATCTGTGGTTACTATGGGGTTTGTATTTATTCATTTTAAACACATTCTGAAAAAATAAAT
ACATGCTCTCAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGCATAATGTATAGTTCCATGTGTTTGTGCTTTTCGCATTTTTCTTCCTATATTTGAC
TTCTAGTTTCATACTGTTGTGGCTGGGGAAAATGCTTGACATAATTTCTAGTGTCTTAAA
TTTGTTAAGACTTGTTTTGTGACCTAGCATGTGATCTATTCTAGAGAATGTTTCATGTGC
ACTTGAAGAGAATGTGTATTCTGCTGTTTGGGGATGGAATGTGCTGCAGATACCTATTAA
GTTCAACTGGTCTGTTATATCACTTAAGACCACCGTTGCCTTATTTTCTGTCTGTAAGTG
GGGTATTAAATTCCCTTACCAATATTATATTATTGCCACATTTTCTCTTTTTGACTATTT
GCTTTAGATATCTGTATTGAGAGCATGTGTGTTAATGAGTGTAATATCCTTTTTGTATTG
TCTCTGTCAATACATAATACCCTTCTGTTATAGCCTTTGTTTTAAATTCTATTTTATCTG
AGTATTGTTACCACCACTTTCTTGCCATTTCTGTTTGCATGAAATATCTTTTTTTCATCC
TCTCACTTCCCACTTGTTAGTATTTAGTTCTAAAGTGAGTCACTAGTAGAGAGCCGAAAG
TCTTATTTTTAGTTTTTAATCCAGTCACCTTGTTTTGTTTGGAGCACTTAGTCTTTTGAC
ATTTAAGGTAATAATTGCTAGGTATTTACTTAATTGCCATTTTATTACTTGTTTTCTGGT
TGTTTTTATAGTCCTTCCCTGTTCTGTTCTTTTTAAATTTTCTCTGTGGTATGATGATTT
TCTTTAGTGGTATGTTTCTGATTTTTTCTCTCATTTTTGTGTAATTATTGTAAGTTTTTG
ATCTGTGGTTACTATGGGGTTTGTATTTATTCATTTTAAACACATTCTGAAAAAATAAAT
ACATGCTCTCAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-285, gnl|bosTau2|chr1 (102781182-102781463)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-285, gnl|bosTau2|chr1 (102781182-102781463)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               vin (0.332557)
               

               
               ece (0.229305)
               

               
               thg (0.126791)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               ece (0.229305)
               

               
               thg (0.126791)