Non-Coding RNA Search

Ss1.1-rthg14_g13.5

Sequence:


               
               TTTTTAAAAACATTTTTCTAAAGAGGTCAGATTTAAGCAAATTACTTATAGCTGTTTTTA
AACTATTAATGTGTTAACATGGTGTGCATTTTTAAGTTCTGCTTTAGTTACATATCTTAA
TTTAGTGTTTTCTTTGGAAAAGTACCACAAATATTAGGAAAAAAAAATAGTATTCTGCTT
GAGTCTTTCTAACTTTATGGTCCCAGTTTTTAGTACTTTTGTTAAATCTGATGTTAGTTC
AGTGTTTTTCAGAAATGTGTTCATTTTGGAAAACAGAACTAGAGGGAAGTTTTTTTTTTT
TTTTTTGAAGTACATATAACTGCTCTTCATACTGTAATTGAAAACTTGCTTTAGAATCTT
TTTTTTTTCTTAAAATTTCAATTAAAATCTTCAAGTAACATATTTATTGCATGCTTATAT
ATTGATGTTGGAATTGTAATTGTTTGTTAATTTTTGTTTACTGGTTTGCCGAAGTTTATA
TGTACATAAATAACACTAATATTTATCATCTTGGGGATTGTTCTATAATCTAATACTTGA
TTTTTGCTCTTTTCTTGCTTTCCTGATATCAGTTGTGATATAGTTTAGAAAGCAAGCTAT
TGGACTTTTTCATCTTACTCATTAAAAAAGAAATATTCTTAGATAGTGTACTCTTCAGAA
TCACATTAATTTGGGAAAAGTCAGAGGTCAGCAAACTTTTTGAAAGGGCAAGATAGTAAT
TATTATTGGCTTTGCAAGCTTAAATATGATCTCCATCACATTTATCAGCTCTGCCAGGTA
GTGTGAAAGCATCCATAGACAACATATAGAGGGATAAGTGTGACTTCGGTAAAATTTTAC
TTGCAAAAACATCTATTGTGGCACATAGGTGGTAGTTTGCTCACCTCTGATATGAGTCCA
TTTAGGTTAAGCTTTTGGGGAGAAATTAGCATTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTAAAAACATTTTTCTAAAGAGGTCAGATTTAAGCAAATTACTTATAGCTGTTTTTA
AACTATTAATGTGTTAACATGGTGTGCATTTTTAAGTTCTGCTTTAGTTACATATCTTAA
TTTAGTGTTTTCTTTGGAAAAGTACCACAAATATTAGGAAAAAAAAATAGTATTCTGCTT
GAGTCTTTCTAACTTTATGGTCCCAGTTTTTAGTACTTTTGTTAAATCTGATGTTAGTTC
AGTGTTTTTCAGAAATGTGTTCATTTTGGAAAACAGAACTAGAGGGAAGTTTTTTTTTTT
TTTTTTGAAGTACATATAACTGCTCTTCATACTGTAATTGAAAACTTGCTTTAGAATCTT
TTTTTTTTCTTAAAATTTCAATTAAAATCTTCAAGTAACATATTTATTGCATGCTTATAT
ATTGATGTTGGAATTGTAATTGTTTGTTAATTTTTGTTTACTGGTTTGCCGAAGTTTATA
TGTACATAAATAACACTAATATTTATCATCTTGGGGATTGTTCTATAATCTAATACTTGA
TTTTTGCTCTTTTCTTGCTTTCCTGATATCAGTTGTGATATAGTTTAGAAAGCAAGCTAT
TGGACTTTTTCATCTTACTCATTAAAAAAGAAATATTCTTAGATAGTGTACTCTTCAGAA
TCACATTAATTTGGGAAAAGTCAGAGGTCAGCAAACTTTTTGAAAGGGCAAGATAGTAAT
TATTATTGGCTTTGCAAGCTTAAATATGATCTCCATCACATTTATCAGCTCTGCCAGGTA
GTGTGAAAGCATCCATAGACAACATATAGAGGGATAAGTGTGACTTCGGTAAAATTTTAC
TTGCAAAAACATCTATTGTGGCACATAGGTGGTAGTTTGCTCACCTCTGATATGAGTCCA
TTTAGGTTAAGCTTTTGGGGAGAAATTAGCATTTTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-927, gnl|bosTau2|chr10 (43065685-43066607)
               

               
               1-927, gnl|Hg17|chr15 (46220244-46219283)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-927, gnl|bosTau2|chr10 (43065685-43066607)
               

               
               1-927, gnl|Hg17|chr15 (46220244-46219283)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               tes (0.207814)
               

               
               fco (0.157208)
               

               
               liv (0.146284)
               

               
               thg (0.126791)
               

               
               ebs (0.118301)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               fco (0.157208)
               

               
               liv (0.146284)
               

               
               thg (0.126791)
               

               
               ebs (0.118301)

	1-927, gnl\|bosTau2\|chr10 (43065685-43066607)
	1-927, gnl\|Hg17\|chr15 (46220244-46219283)

	tes (0.207814)
	fco (0.157208)
	liv (0.146284)
	thg (0.126791)
	ebs (0.118301)