Ss1.1-rthg15_c24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCATGGCAACCCCCGATGAGTCTGAAGAGGAGCATGGAGAGACTGCACATACAGGAGAA AAGTTATCTAAATGCAGCCCTGAAGCTCCTGCGGGCAGTTCACTTGAAAACCACTATGAA GAAGATTATCTTGTAATTGATGGGCTAAAATTAAAAGCTGAAGAATGCATTGAAAATATA ACTAACAAGTTTAAAGAAATAGATGCTTTGATGTCTGAATTTTAGGTTATGGGTATTTTC ACAAGTTAATGATAAAAACGTTTATATTTTTATGTTTTCCCAATCAGAACTTAGAAATGT TTAGTGAAATAGTTACATGTTATATCAAAGTTGATATTTGTGATAACTTTCTACTTTATA TATTAGGAAAATCCATTATTTTGAGAGTCAATCAAATGGTATTTAAGTTAGTGTTATATG TTTAGAATTTAAGAAACCCTGGTATTTGTATTTGTAGATTTTTTTTCTTGTTTGCCTTAA TTTTAAAATGGTTTATGAAGCCTACTGCAAAAATACATGCTTTACAATGATTATTTAGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCATGGCAACCCCCGATGAGTCTGAAGAGGAGCATGGAGAGACTGCACATACAGGAGAA AAGTTATCTAAATGCAGCCCTGAAGCTCCTGCGGGCAGTTCACTTGAAAACCACTATGAA GAAGATTATCTTGTAATTGATGGGCTAAAATTAAAAGCTGAAGAATGCATTGAAAATATA ACTAACAAGTTTAAAGAAATAGATGCTTTGATGTCTGAATTTTAGGTTATGGGTATTTTC ACAAGTTAATGATAAAAACGTTTATATTTTTATGTTTTCCCAATCAGAACTTAGAAATGT TTAGTGAAATAGTTACATGTTATATCAAAGTTGATATTTGTGATAACTTTCTACTTTATA TATTAGGAAAATCCATTATTTTGAGAGTCAATCAAATGGTATTTAAGTTAGTGTTATATG TTTAGAATTTAAGAAACCCTGGTATTTGTATTTGTAGATTTTTTTTCTTGTTTGCCTTAA TTTTAAAATGGTTTATGAAGCCTACTGCAAAAATACATGCTTTACAATGATTATTTAGAC |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 62-224, gnl|bosTau2|chr22 (968330-968168) | |
| 62-224, gnl|canFam2|chr23 (18818936-18818400) | |
| 62-224, gnl|dasNov1|scaffold_845 (147495-148016) | |
| 62-224, gnl|echTel1|scaffold_308272 (38535-38005) | |
| 62-224, gnl|hg17|chr3 (28540991-28541524) | |
| 62-224, gnl|Hg17|chr3 (28541020-28541182) | |
| 62-224, gnl|loxAfr1|scaffold_4379 (11674-11144) | |
| 62-224, gnl|mm7|chr9 (117606446-117605926) | |
| 62-224, gnl|Mm7|chr9 (117606414-117606252) | |
| 62-224, gnl|monDom2|scaffold_7 (84451573-84452096) | |
| 62-224, gnl|oryCun1|scaffold_200652 (54570-54022) | |
| 62-224, gnl|panTro1|chr2 (29482427-29482960) | |
| 62-224, gnl|rheMac2|chr2 (170935673-170936204) | |
| 62-224, gnl|rn3|chr8 (122889140-122888648) | |
| 234-539, gnl|bosTau2|chr22 (968127-967828) | |
| 234-539, gnl|canFam2|chr23 (18818936-18818400) | |
| 234-539, gnl|dasNov1|scaffold_845 (147495-148016) | |
| 234-539, gnl|echTel1|scaffold_308272 (38535-38005) | |
| 234-539, gnl|hg17|chr3 (28540991-28541524) | |
| 234-539, gnl|Hg17|chr3 (28541196-28541494) | |
| 234-539, gnl|loxAfr1|scaffold_4379 (11674-11144) | |
| 234-539, gnl|mm7|chr9 (117606446-117605926) | |
| 234-539, gnl|Mm7|chr9 (117606237-117605951) | |
| 234-539, gnl|monDom2|scaffold_7 (84451573-84452096) | |
| 234-539, gnl|oryCun1|scaffold_200652 (54570-54022) | |
| 234-539, gnl|panTro1|chr2 (29482427-29482960) | |
| 234-539, gnl|rheMac2|chr2 (170935673-170936204) | |
| 234-539, gnl|rn3|chr8 (122889140-122888648) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 62-224, gnl|bosTau2|chr22 (968330-968168) | |
| 62-224, gnl|canFam2|chr23 (18818936-18818400) | |
| 62-224, gnl|dasNov1|scaffold_845 (147495-148016) | |
| 62-224, gnl|echTel1|scaffold_308272 (38535-38005) | |
| 62-224, gnl|hg17|chr3 (28540991-28541524) | |
| 62-224, gnl|Hg17|chr3 (28541020-28541182) | |
| 62-224, gnl|loxAfr1|scaffold_4379 (11674-11144) | |
| 62-224, gnl|mm7|chr9 (117606446-117605926) | |
| 62-224, gnl|Mm7|chr9 (117606414-117606252) | |
| 62-224, gnl|monDom2|scaffold_7 (84451573-84452096) | |
| 62-224, gnl|oryCun1|scaffold_200652 (54570-54022) | |
| 62-224, gnl|panTro1|chr2 (29482427-29482960) | |
| 62-224, gnl|rheMac2|chr2 (170935673-170936204) | |
| 62-224, gnl|rn3|chr8 (122889140-122888648) | |
| 234-539, gnl|bosTau2|chr22 (968127-967828) | |
| 234-539, gnl|canFam2|chr23 (18818936-18818400) | |
| 234-539, gnl|dasNov1|scaffold_845 (147495-148016) | |
| 234-539, gnl|echTel1|scaffold_308272 (38535-38005) | |
| 234-539, gnl|hg17|chr3 (28540991-28541524) | |
| 234-539, gnl|Hg17|chr3 (28541196-28541494) | |
| 234-539, gnl|loxAfr1|scaffold_4379 (11674-11144) | |
| 234-539, gnl|mm7|chr9 (117606446-117605926) | |
| 234-539, gnl|Mm7|chr9 (117606237-117605951) | |
| 234-539, gnl|monDom2|scaffold_7 (84451573-84452096) | |
| 234-539, gnl|oryCun1|scaffold_200652 (54570-54022) | |
| 234-539, gnl|panTro1|chr2 (29482427-29482960) | |
| 234-539, gnl|rheMac2|chr2 (170935673-170936204) | |
| 234-539, gnl|rn3|chr8 (122889140-122888648) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| gul (0.177588) | |
| fat (0.147427) | |
| kid (0.129735) | |
| thg (0.126791) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| gul (0.177588) | |
| fat (0.147427) | |
| kid (0.129735) | |
| thg (0.126791) |