Non-Coding RNA Search

Ss1.1-rthg17_f21.5

Sequence:


               
               TCCATATGCCATGGGTGCAGCTCTAAAAAAAAAAAAGAAATTTAGAAACAAATCTTGTAG
AAACTGAGGTATGTTTAAGTCTGTATTAAGAAAAGTAAAGGTTTTATTCTATATGAGAAA
TGAAAATTATTAAGATAATCACTGTTAAATATTTTCAAGATTGAAAAATATTTATTTAAG
AGATTAGTAGCTTCAGGATCAAGTAAGTAATGATGATTACCTTTTGCTTTAGAAAACCAG
GTTTCACTACTAACTCCTTTTAATTTTTTCTTCAGGGGTATGACAAAGCAGCCAAGATTG
CTAAGACTGCACACAAAAATGGGTCAACCTTAAAGGCAACTGCTGTTGAACTTGGCTATC
TCACAGCAGAGCAGTTTGATGAGTGGGTAAAACCTAAGGACATGCTGGGTCCAAAGTGAT
TTAATAAATTTGTAATAAAAATGGCCAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCATATGCCATGGGTGCAGCTCTAAAAAAAAAAAAGAAATTTAGAAACAAATCTTGTAG
AAACTGAGGTATGTTTAAGTCTGTATTAAGAAAAGTAAAGGTTTTATTCTATATGAGAAA
TGAAAATTATTAAGATAATCACTGTTAAATATTTTCAAGATTGAAAAATATTTATTTAAG
AGATTAGTAGCTTCAGGATCAAGTAAGTAATGATGATTACCTTTTGCTTTAGAAAACCAG
GTTTCACTACTAACTCCTTTTAATTTTTTCTTCAGGGGTATGACAAAGCAGCCAAGATTG
CTAAGACTGCACACAAAAATGGGTCAACCTTAAAGGCAACTGCTGTTGAACTTGGCTATC
TCACAGCAGAGCAGTTTGATGAGTGGGTAAAACCTAAGGACATGCTGGGTCCAAAGTGAT
TTAATAAATTTGTAATAAAAATGGCCAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               41-465, gnl|bosTau2|chr16 (24099358-24099780)
               

               
               41-465, gnl|Hg17|chr1 (237987552-237987125)
               

               
               41-465, gnl|Mm7|chr1 (175568064-175567685)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-465, gnl|bosTau2|chr16 (24099358-24099780)
               

               
               41-465, gnl|Hg17|chr1 (237987552-237987125)
               

               
               41-465, gnl|Mm7|chr1 (175568064-175567685)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ski (0.146735)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)
               

               
               thg (0.126791)

	41-465, gnl\|bosTau2\|chr16 (24099358-24099780)
	41-465, gnl\|Hg17\|chr1 (237987552-237987125)
	41-465, gnl\|Mm7\|chr1 (175568064-175567685)