Non-Coding RNA Search

Ss1.1-rthg19_h9.5

Sequence:


               
               TTAATAAGCTTCTGGTAGTTGTCATTTTGTAAACGTTCACTAGGTGGCGGAAGTGTGCTG
TGGACCAGCATCGCTAAAGTTAACGTTAATAAGCACATGCCCTCATTTACTCTACTTCTG
TGGGCACTCACTCTCTGGGAGCAAATTATACCGATGTGTTTTTCAGTCATCTCAGACTTC
CCTCTCTGATGTGGCTGGGTATGTCTGCTCTTGTACAACTACAGAAATGTTGATGAGTGA
ATTTCTCAGGAAGTTGTCAGTCTCAAATTACTCTTATTCTTATGTATAACATTGATAGTT
TCTTGTAAAGATGATTTGCAGAACTTGAAATAGAAAAAAACCAAACATCAAGACTGCTGT
TTGTTTGGGAATCATATTTAGGGTATAACTCAGTAGGATTTTAACCAGATTCTAAAAGTT
GTTTCATATTAGACTTCCTGAGGGATCTCAAGTTACCTGTCATCACTGTTTAGAAAAAAA
GACTTGTCAATAACCTGTTGACACAGTGTCCCTAAATATGTATGTGCTTCTTTAATGTAG
GAGCTGGAGTTGCGTTGGTTGGTGGTTTGAAACTTCTAGCTAGACTGTCCCTTCTCACAG
AACAAGACTTATGGACTGTTAATGGACTTCCAAATGAAAATAACTCTTCCGATCATCTGC
CTTTACTGGCTAAGTTCAGACTTGACCTCTGACTCTTCTTTGATGATGTATATACTTTGC
TTTCTCATTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAATAAGCTTCTGGTAGTTGTCATTTTGTAAACGTTCACTAGGTGGCGGAAGTGTGCTG
TGGACCAGCATCGCTAAAGTTAACGTTAATAAGCACATGCCCTCATTTACTCTACTTCTG
TGGGCACTCACTCTCTGGGAGCAAATTATACCGATGTGTTTTTCAGTCATCTCAGACTTC
CCTCTCTGATGTGGCTGGGTATGTCTGCTCTTGTACAACTACAGAAATGTTGATGAGTGA
ATTTCTCAGGAAGTTGTCAGTCTCAAATTACTCTTATTCTTATGTATAACATTGATAGTT
TCTTGTAAAGATGATTTGCAGAACTTGAAATAGAAAAAAACCAAACATCAAGACTGCTGT
TTGTTTGGGAATCATATTTAGGGTATAACTCAGTAGGATTTTAACCAGATTCTAAAAGTT
GTTTCATATTAGACTTCCTGAGGGATCTCAAGTTACCTGTCATCACTGTTTAGAAAAAAA
GACTTGTCAATAACCTGTTGACACAGTGTCCCTAAATATGTATGTGCTTCTTTAATGTAG
GAGCTGGAGTTGCGTTGGTTGGTGGTTTGAAACTTCTAGCTAGACTGTCCCTTCTCACAG
AACAAGACTTATGGACTGTTAATGGACTTCCAAATGAAAATAACTCTTCCGATCATCTGC
CTTTACTGGCTAAGTTCAGACTTGACCTCTGACTCTTCTTTGATGATGTATATACTTTGC
TTTCTCATTTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               38-730, gnl|bosTau2|chr16 (52659108-52659797)
               

               
               38-730, gnl|Hg17|chr1 (209557417-209556742)
               

               
               38-730, gnl|Mm7|chr1 (190498044-190498626)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               38-730, gnl|bosTau2|chr16 (52659108-52659797)
               

               
               38-730, gnl|Hg17|chr1 (209557417-209556742)
               

               
               38-730, gnl|Mm7|chr1 (190498044-190498626)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               liv (0.146284)
               

               
               spl (0.143184)
               

               
               ret (0.128733)
               

               
               thg (0.126791)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               spl (0.143184)
               

               
               ret (0.128733)
               

               
               thg (0.126791)

	38-730, gnl\|bosTau2\|chr16 (52659108-52659797)
	38-730, gnl\|Hg17\|chr1 (209557417-209556742)
	38-730, gnl\|Mm7\|chr1 (190498044-190498626)