Ss1.1-rthg19_j24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTCTATTGCTGTATGATACAGAACTCTTTTTGGCATCAATATTTGTGTTTCCAGTACC TCAGTTGTTTGGACTTTACTGCCTGTATACGTTTTGTGAAATGGTCATGTTTTTGGGTAG GTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCTTCATTATAGTCCGTG GCATGTATGTTCAGACCTTGGATGCTTTACGCCGACTTAGCAGGAGCCCCGCCTGATGTT CCCAGGAGGGCGGCCTAACCTTTCATTGTCAGGAGACAAGGAGGCCATGGATGTGCTCTT GATTCTATTTTGATCATGGGAGAGACAAAGGAGAGAGGTTTTCTTTCTTTCTTTCTTTCT TTCTTTAACATACTGAAGATGGTGCTGCGTCAAGAAGGACCTGTTTTTCTTCCCTCTCCC TTCTTTTTGGAGTACCCTGTAGGAGGAAAGATGGATGACATGCATGGTGGGAATCTGTGG CCTCTGGTGCTTTGTCCTGTATTTGGTTTAATGTTTTTGTCCTAATCTCTTCAATCAATA AAATTGTGCGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTCTATTGCTGTATGATACAGAACTCTTTTTGGCATCAATATTTGTGTTTCCAGTACC TCAGTTGTTTGGACTTTACTGCCTGTATACGTTTTGTGAAATGGTCATGTTTTTGGGTAG GTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCTTCATTATAGTCCGTG GCATGTATGTTCAGACCTTGGATGCTTTACGCCGACTTAGCAGGAGCCCCGCCTGATGTT CCCAGGAGGGCGGCCTAACCTTTCATTGTCAGGAGACAAGGAGGCCATGGATGTGCTCTT GATTCTATTTTGATCATGGGAGAGACAAAGGAGAGAGGTTTTCTTTCTTTCTTTCTTTCT TTCTTTAACATACTGAAGATGGTGCTGCGTCAAGAAGGACCTGTTTTTCTTCCCTCTCCC TTCTTTTTGGAGTACCCTGTAGGAGGAAAGATGGATGACATGCATGGTGGGAATCTGTGG CCTCTGGTGCTTTGTCCTGTATTTGGTTTAATGTTTTTGTCCTAATCTCTTCAATCAATA AAATTGTGCGTA |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-352, gnl|bosTau2|chr26 (31424643-31424992) | |
| 1-352, gnl|Hg17|chr2 (12832911-12833270) | |
| 1-352, gnl|Mm7|chr12 (15846667-15846328) | |
| 364-552, gnl|bosTau2|chr26 (31424982-31425170) | |
| 364-552, gnl|canFam2|chr17 (12223784-12224010) | |
| 364-552, gnl|dasNov1|scaffold_155325 (994-825) | |
| 364-552, gnl|echTel1|scaffold_291808 (14206-14429) | |
| 364-552, gnl|fr1|chrUn (169812886-169813076) | |
| 364-552, gnl|galGal2|chr3 (96130711-96130894) | |
| 364-552, gnl|hg17|chr2 (12833251-12833458) | |
| 364-552, gnl|Hg17|chr2 (12833251-12833447) | |
| 364-552, gnl|loxAfr1|scaffold_28594 (43830-43606) | |
| 364-552, gnl|mm7|chr12 (15846339-15846142) | |
| 364-552, gnl|Mm7|chr12 (15846338-15846151) | |
| 364-552, gnl|monDom2|scaffold_104 (2840060-2839797) | |
| 364-552, gnl|oryCun1|scaffold_205661 (2837-2638) | |
| 364-552, gnl|panTro1|chr12 (13583013-13583221) | |
| 364-552, gnl|rheMac2|chr13 (12786527-12786735) | |
| 364-552, gnl|rn3|chr6 (39477395-39477198) | |
| 364-552, gnl|tetNig1|chr14 (7538970-7539191) | |
| 364-552, gnl|xenTro1|scaffold_688 (247838-247552) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-352, gnl|bosTau2|chr26 (31424643-31424992) | |
| 1-352, gnl|Hg17|chr2 (12832911-12833270) | |
| 1-352, gnl|Mm7|chr12 (15846667-15846328) | |
| 364-552, gnl|bosTau2|chr26 (31424982-31425170) | |
| 364-552, gnl|canFam2|chr17 (12223784-12224010) | |
| 364-552, gnl|dasNov1|scaffold_155325 (994-825) | |
| 364-552, gnl|echTel1|scaffold_291808 (14206-14429) | |
| 364-552, gnl|fr1|chrUn (169812886-169813076) | |
| 364-552, gnl|galGal2|chr3 (96130711-96130894) | |
| 364-552, gnl|hg17|chr2 (12833251-12833458) | |
| 364-552, gnl|Hg17|chr2 (12833251-12833447) | |
| 364-552, gnl|loxAfr1|scaffold_28594 (43830-43606) | |
| 364-552, gnl|mm7|chr12 (15846339-15846142) | |
| 364-552, gnl|Mm7|chr12 (15846338-15846151) | |
| 364-552, gnl|monDom2|scaffold_104 (2840060-2839797) | |
| 364-552, gnl|oryCun1|scaffold_205661 (2837-2638) | |
| 364-552, gnl|panTro1|chr12 (13583013-13583221) | |
| 364-552, gnl|rheMac2|chr13 (12786527-12786735) | |
| 364-552, gnl|rn3|chr6 (39477395-39477198) | |
| 364-552, gnl|tetNig1|chr14 (7538970-7539191) | |
| 364-552, gnl|xenTro1|scaffold_688 (247838-247552) |
| Expressed library(ies): 9 entry(ies) | More info |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
| fty (0.17584) | |
| mcp (0.170648) | |
| cut (0.169924) | |
| mga (0.160205) | |
| csk (0.140746) | |
| ssp (0.13552) | |
| cov (0.132153) | |
| ova (0.129132) | |
| thg (0.126791) |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| mcp (0.170648) | |
| cut (0.169924) | |
| mga (0.160205) | |
| csk (0.140746) | |
| ssp (0.13552) | |
| cov (0.132153) | |
| ova (0.129132) | |
| thg (0.126791) |