Non-Coding RNA Search

Ss1.1-rthg20_d16.5

Sequence:


               
               AAAACCCTACAGGTAAGAGAATGGCCTGTTTGGGAAATGTTAAATTCTTCCACATAACTG
AAGCAGAGGATATGATTGGAGAAGTGATGAGAGATTGGACTAGGTAGTGAAGGTGTGATT
AACCAAGCTGACAAGTTTGAACTTTATTCTGAAGACAGTGCAGAGCCATCAAAGTGTTTT
AAGCAGGAATGTGACATCTCATTTACGGTTTTGAAAGATCATTCTGGCTACATTATTGAT
AAGAGACTGGAATGCTGGCTAGAACAGAAGTAGGGAGAACAATTAGCCTATGGCAGCAAT
CTGGGCTAGAAATGATTATATTCCTAAGCTAATGGCAGTGGACCTGGAAAGAGTAATAAT
AGGTAACATTGATTAAACACATAGTATGTGCTGACGTGGCATCTATTGTCCCATGAAGTA
TTGAAGGCTTAGCAAAGTTAATCTGTCCAAGGCCTCTAAGAATTAAAGTCAGTCAGCAGT
TAGAACCATTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAACCCTACAGGTAAGAGAATGGCCTGTTTGGGAAATGTTAAATTCTTCCACATAACTG
AAGCAGAGGATATGATTGGAGAAGTGATGAGAGATTGGACTAGGTAGTGAAGGTGTGATT
AACCAAGCTGACAAGTTTGAACTTTATTCTGAAGACAGTGCAGAGCCATCAAAGTGTTTT
AAGCAGGAATGTGACATCTCATTTACGGTTTTGAAAGATCATTCTGGCTACATTATTGAT
AAGAGACTGGAATGCTGGCTAGAACAGAAGTAGGGAGAACAATTAGCCTATGGCAGCAAT
CTGGGCTAGAAATGATTATATTCCTAAGCTAATGGCAGTGGACCTGGAAAGAGTAATAAT
AGGTAACATTGATTAAACACATAGTATGTGCTGACGTGGCATCTATTGTCCCATGAAGTA
TTGAAGGCTTAGCAAAGTTAATCTGTCCAAGGCCTCTAAGAATTAAAGTCAGTCAGCAGT
TAGAACCATTGT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               7-492, gnl|bosTau2|chr16 (1853606-1853111)
               

               
               7-492, gnl|Hg17|chr1 (201261384-201261885)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-492, gnl|bosTau2|chr16 (1853606-1853111)
               

               
               7-492, gnl|Hg17|chr1 (201261384-201261885)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               liv (0.146284)
               

               
               thg (0.126791)
               

               
               med (0.116252)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               thg (0.126791)
               

               
               med (0.116252)

	7-492, gnl\|bosTau2\|chr16 (1853606-1853111)
	7-492, gnl\|Hg17\|chr1 (201261384-201261885)