Non-Coding RNA Search

Ss1.1-rthg21_c18.5

Sequence:


               
               GAACATCGAGGGATTCACAGCAAGGAGAAGCCTTATCAATGTAAAGAGTGTGGCAAAGCC
TTCAGTCAGAAGACAGGTCTTAGTCATCATCTCAAAATCCACACAGGAATGAAACCTTTT
GAATGTTCTGAATGCGGGCGAGCCTTCAGCTGTAAGTCAAATCTCAATAAACATAAGAGA
GTCCATTCTGAGAAAAAATCCTATACGTGTATGTAAAGAGTATAGGAAGACCTATAGGCA
AAGAGCAACGCTGATGCAACATCAGAAAGGCTACATCCTGCTAAGCACAAGCAGTGGGGT
GAATGAGATGAAGCTTGCAGTGGAAGCTCAGCCCTGATGAAGCACCAGAGGATCCACTAA
AATGACTCCTTGCCAAGGTGTTGGGTGATAATTTCAAGTAGAATCCAGAATTTTCTATAA
GATAAAATGTTTCTTGAATTTCATTATTTAAAGAACGTCAAAGATACCACATTGAAAATT
CGTTATAAAGGTCATAAATGCTATGAAAGTTGAGAATTTGGGAAAATAAACATCAACAAG
AAATTTATTCTGGTTACCTTTGTTAAGTGCAATGAAATGTCAAATAATACAATGAAAAAG
TACACAAGGACAGCTGTAAAAAAATACAGGGTTTTTTTCATTTTTTTGTTTGTTTGTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACATCGAGGGATTCACAGCAAGGAGAAGCCTTATCAATGTAAAGAGTGTGGCAAAGCC
TTCAGTCAGAAGACAGGTCTTAGTCATCATCTCAAAATCCACACAGGAATGAAACCTTTT
GAATGTTCTGAATGCGGGCGAGCCTTCAGCTGTAAGTCAAATCTCAATAAACATAAGAGA
GTCCATTCTGAGAAAAAATCCTATACGTGTATGTAAAGAGTATAGGAAGACCTATAGGCA
AAGAGCAACGCTGATGCAACATCAGAAAGGCTACATCCTGCTAAGCACAAGCAGTGGGGT
GAATGAGATGAAGCTTGCAGTGGAAGCTCAGCCCTGATGAAGCACCAGAGGATCCACTAA
AATGACTCCTTGCCAAGGTGTTGGGTGATAATTTCAAGTAGAATCCAGAATTTTCTATAA
GATAAAATGTTTCTTGAATTTCATTATTTAAAGAACGTCAAAGATACCACATTGAAAATT
CGTTATAAAGGTCATAAATGCTATGAAAGTTGAGAATTTGGGAAAATAAACATCAACAAG
AAATTTATTCTGGTTACCTTTGTTAAGTGCAATGAAATGTCAAATAATACAATGAAAAAG
TACACAAGGACAGCTGTAAAAAAATACAGGGTTTTTTTCATTTTTTTGTTTGTTTGTTTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               31-625, gnl|bosTau2|chr23 (24521971-24521381)
               


               
               43-500, gnl|bosTau2|chr25 (18641406-18640961)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-625, gnl|bosTau2|chr23 (24521971-24521381)
               


               
               43-500, gnl|bosTau2|chr25 (18641406-18640961)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	31-625, gnl\|bosTau2\|chr23 (24521971-24521381)

	43-500, gnl\|bosTau2\|chr25 (18641406-18640961)