Non-Coding RNA Search

Ss1.1-rthg21_o8.5

Sequence:


               
               ATGTTCTTTCTGATTGAGGTCAGGATTCCTGGGGACCCCGCGTGGCCCTCAAAAGCACAG
AAAGTGGCTTCCCTGTCACCAGATCTCTTGAGACAATCCGATCCTTCCTGGTGGCCCCGC
TCCCCCCGAGGTGGCCCTTCATGCTCCCCCACCTGTCTGTGGGGTGCGGGAGCCCTGCCC
TGCCCTCCGTGGGTCTCACCCCAGGGACGGGGTGGTGGGTGGATGCTCTGACTTCCTCGA
GGCCCCTCCCGCCCCCACACCACACGCCGCTGTCCTGGGCCCGGCTTTTTAATACAACTA
CAGCACACACTGATGACTTTATTTCTGTTTCAGAAAATAAAGGTGTTTAATCAGGACATT
GAAAACTTGGCAGAAGGAGAAGAAATTGTAAAGGAGAAAGAGGCCCGCTTATATAACAAA
ATCAGAGAGGAGTTTAAAAGCTGGATAGTCACACTTGATTGCAATTCCAAAAAAGGTAAG
TCCTGGGACCCGGCTCCGCCTAAAAGCAGCGTCGTATTTACCAAGACCAGAAGCTGCTCC
CGGCACATGGAAGGTGAGCAAAGAGCTGACTGACGGTGCCTACGCCAGGGAGCCCTTGGC
ATCTCTAGCTGCTTCCCAGCCACCGTGTGGGGCCCTGCCTGAGTCAGTCCCACAGAAGAC
CATGCCACACTCTTGCTTTCTGCTGCTTTGTTTCAAGGCCAGGCAGTGCCACCTATCCCA
TCTCTTCACCCCTAATCCAAGACCAGAGAGCTCAAGACCTGGCAGAGTTGCAGCTTCCAT
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------ATTCTGCTCTGGCCCAAATACCAGTAGTGTGTGTGTGTGTGTGTGTGC
GCGCGTGTGTGTGAATGAGTCTTTGTTCTGGCACTTGATAAAAACAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTTCTTTCTGATTGAGGTCAGGATTCCTGGGGACCCCGCGTGGCCCTCAAAAGCACAG
AAAGTGGCTTCCCTGTCACCAGATCTCTTGAGACAATCCGATCCTTCCTGGTGGCCCCGC
TCCCCCCGAGGTGGCCCTTCATGCTCCCCCACCTGTCTGTGGGGTGCGGGAGCCCTGCCC
TGCCCTCCGTGGGTCTCACCCCAGGGACGGGGTGGTGGGTGGATGCTCTGACTTCCTCGA
GGCCCCTCCCGCCCCCACACCACACGCCGCTGTCCTGGGCCCGGCTTTTTAATACAACTA
CAGCACACACTGATGACTTTATTTCTGTTTCAGAAAATAAAGGTGTTTAATCAGGACATT
GAAAACTTGGCAGAAGGAGAAGAAATTGTAAAGGAGAAAGAGGCCCGCTTATATAACAAA
ATCAGAGAGGAGTTTAAAAGCTGGATAGTCACACTTGATTGCAATTCCAAAAAAGGTAAG
TCCTGGGACCCGGCTCCGCCTAAAAGCAGCGTCGTATTTACCAAGACCAGAAGCTGCTCC
CGGCACATGGAAGGTGAGCAAAGAGCTGACTGACGGTGCCTACGCCAGGGAGCCCTTGGC
ATCTCTAGCTGCTTCCCAGCCACCGTGTGGGGCCCTGCCTGAGTCAGTCCCACAGAAGAC
CATGCCACACTCTTGCTTTCTGCTGCTTTGTTTCAAGGCCAGGCAGTGCCACCTATCCCA
TCTCTTCACCCCTAATCCAAGACCAGAGAGCTCAAGACCTGGCAGAGTTGCAGCTTCCAT
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------ATTCTGCTCTGGCCCAAATACCAGTAGTGTGTGTGTGTGTGTGTGTGC
GCGCGTGTGTGTGAATGAGTCTTTGTTCTGGCACTTGATAAAAACAGC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               211-733, gnl|bosTau2|chr1 (93418622-93419152)
               

               
               211-733, gnl|Hg17|chr21 (41692919-41694177)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               211-733, gnl|bosTau2|chr1 (93418622-93419152)
               

               
               211-733, gnl|Hg17|chr21 (41692919-41694177)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	211-733, gnl\|bosTau2\|chr1 (93418622-93419152)
	211-733, gnl\|Hg17\|chr21 (41692919-41694177)