Non-Coding RNA Search

Ss1.1-rthg25_a11.5

Sequence:


               
               CTTATTTTTCAGATGCTGCCCAGCTTGGGCCATTCCTAGCCGCCCTTAAAGACTTGGAGA
ATTTTTAGAAGATGAAAATGCTATAGGTTGTCCCAATTAAATAATAGTTTTTATGAGGTG
GGGGAGTCAGGCAATGCTTCTTAAAACCTACAAAATTTACTTTGATATTAGGTATTTAAG
TCTTTTGGCAGTTGCAGTAGTTGAATATTAGACAGTAGTTTCCAAAAATTTATAATTATT
CCAAACTTTCATTCCAAGAAATGAGACCTCAAGGTAATTACTCAAATTTTATATAAAATT
GTAATAATGACTTGTTTTTTATTTTAGTTAAAAAAATCTATGTTCTTAAATATAGCATTA
GTTCCATTTATAAATACTATTTCCAAACAGTTCTTTTACCAAAGCTTGGAAAAATAACAC
AACTAAATAAAATTTTCTTTGTATACCTCTAACTAGAGATAGGCTCAGGTTTTCACATGG
AAAAGTATGGTGATATGGAAATACATTTTATTATCAAGCTTCTGAGGATATTTACAAAAA
GTGGAATGTAACAAAAAATAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTATTTTTCAGATGCTGCCCAGCTTGGGCCATTCCTAGCCGCCCTTAAAGACTTGGAGA
ATTTTTAGAAGATGAAAATGCTATAGGTTGTCCCAATTAAATAATAGTTTTTATGAGGTG
GGGGAGTCAGGCAATGCTTCTTAAAACCTACAAAATTTACTTTGATATTAGGTATTTAAG
TCTTTTGGCAGTTGCAGTAGTTGAATATTAGACAGTAGTTTCCAAAAATTTATAATTATT
CCAAACTTTCATTCCAAGAAATGAGACCTCAAGGTAATTACTCAAATTTTATATAAAATT
GTAATAATGACTTGTTTTTTATTTTAGTTAAAAAAATCTATGTTCTTAAATATAGCATTA
GTTCCATTTATAAATACTATTTCCAAACAGTTCTTTTACCAAAGCTTGGAAAAATAACAC
AACTAAATAAAATTTTCTTTGTATACCTCTAACTAGAGATAGGCTCAGGTTTTCACATGG
AAAAGTATGGTGATATGGAAATACATTTTATTATCAAGCTTCTGAGGATATTTACAAAAA
GTGGAATGTAACAAAAAATAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               72-559, gnl|bosTau2|chr11 (18838934-18839420)
               

               
               72-559, gnl|Hg17|chr2 (37389080-37389584)
               

               
               72-559, gnl|Mm7|chr17 (77249532-77250031)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               72-559, gnl|bosTau2|chr11 (18838934-18839420)
               

               
               72-559, gnl|Hg17|chr2 (37389080-37389584)
               

               
               72-559, gnl|Mm7|chr17 (77249532-77250031)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               thg (0.126791)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)
               

               
               spc (0.113366)

	72-559, gnl\|bosTau2\|chr11 (18838934-18839420)
	72-559, gnl\|Hg17\|chr2 (37389080-37389584)
	72-559, gnl\|Mm7\|chr17 (77249532-77250031)