Non-Coding RNA Search

Ss1.1-rthg25_a6.5

Sequence:


               
               CTAACTTGAACGAAAGGCACACTAAATATGCCCAGCTCTGAGCAATAAGAACACTTTCGT
TACCTTTGAAGTTTCCGAAGGCATTCCACGTATAGTTTTTATTGATTCACACCATGTCTA
ATAAGACAGATTCGGATGTTAATTTGCCCAAGAACACACAGCCCCTTTGGAGTGAAAAAA
GAAGAAAAAAGCCAAGTCCGTGACAACTAAACGCAAAACGAAATCCTGGATTATATCCTA
GAACAGAAAAAGGACGTAAATGAGACAACTGATGAAATTTAAATAAGGTGTATCAAGTAA
TTATAGTATTATATCAATAGTTTTGATAATTGTACTATGCTTATGTAAGATGTTGATTTT
GGGGGATTATGAGTGAAGAACATAGGGGAACCATACTACTTTTGCAACTTTTTGAAAACC
TAAAATGATTTCAGATTCTGAGCCCCAATTTTTGTTTTGTTTTGATTCTGAGCCTTTATT
GAGGCGTCCAGTACAGAACAGGAAGTAGCTTATAGAAAGCTTTGTGTATTGAATCATTCG
AAATATACTGAAGCAACACATTTTAAAATAGGGCCATATGCCAGTCCCCAGGCTAGAGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAACTTGAACGAAAGGCACACTAAATATGCCCAGCTCTGAGCAATAAGAACACTTTCGT
TACCTTTGAAGTTTCCGAAGGCATTCCACGTATAGTTTTTATTGATTCACACCATGTCTA
ATAAGACAGATTCGGATGTTAATTTGCCCAAGAACACACAGCCCCTTTGGAGTGAAAAAA
GAAGAAAAAAGCCAAGTCCGTGACAACTAAACGCAAAACGAAATCCTGGATTATATCCTA
GAACAGAAAAAGGACGTAAATGAGACAACTGATGAAATTTAAATAAGGTGTATCAAGTAA
TTATAGTATTATATCAATAGTTTTGATAATTGTACTATGCTTATGTAAGATGTTGATTTT
GGGGGATTATGAGTGAAGAACATAGGGGAACCATACTACTTTTGCAACTTTTTGAAAACC
TAAAATGATTTCAGATTCTGAGCCCCAATTTTTGTTTTGTTTTGATTCTGAGCCTTTATT
GAGGCGTCCAGTACAGAACAGGAAGTAGCTTATAGAAAGCTTTGTGTATTGAATCATTCG
AAATATACTGAAGCAACACATTTTAAAATAGGGCCATATGCCAGTCCCCAGGCTAGAGGT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-450, gnl|bosTau2|chr11 (75302072-75302531)
               

               
               2-450, gnl|Hg17|chr9 (122670595-122672091)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-450, gnl|bosTau2|chr11 (75302072-75302531)
               

               
               2-450, gnl|Hg17|chr9 (122670595-122672091)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               thg (0.126791)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)
               

               
               eep (0.122564)

	2-450, gnl\|bosTau2\|chr11 (75302072-75302531)
	2-450, gnl\|Hg17\|chr9 (122670595-122672091)