Non-Coding RNA Search

Ss1.1-rthg25_o13.5

Sequence:


               
               TCCCTTTCAGTGGTAAAGACCTCCTGAACCTAAGGACACACAGATCATGATGCAGCCATG
ACATCCTGACATTAGGCCTATTCTGTATGTTGAATTGATGAAGATTTTAAAAATACATTA
TTACAGATGATAGTTTTTTAGTTTTACACCTTTTTCTCTGACTCTAAAGCTAATTGATAT
GTACAGAGAAATGTAACCAAAAAAAGAGAAGGTGGCTGTTTTTAAATCTAAGTTTTTGTA
TTTAGCCAGCAAACACAGCATGCCTGTTGTGACTCCAGCTGTGTTGTCAGATGCTGTGAA
AAAAGAATAAATAAGAATAAATGGACATAGCCACTCCTAAGAAGTCTAGAATTTTGTTGG
AGAAATAAGACCTGCAAAAACTATTTAAGAGAAAGACAGTAGTAGGAGTTCCATTATGGC
TCAGTGATTAACAAATCTGACTAGCATCCATGAGGACAAAGGTTCGATCCCTGTGCTCAG
AGGGTTAAGGATCTGACGTTGCAGACTTGGCTTGGATCCTGCATTGCTGTAGCTGTGGTG
TAGGCCAGCAGCTACAGCTCTGATTTGACCCCTAGCCGGAGAACCTCCATATGCCGTGGG
------------AAGCAAAAAAAACCAAAAACAAAACAACAACAACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCTTTCAGTGGTAAAGACCTCCTGAACCTAAGGACACACAGATCATGATGCAGCCATG
ACATCCTGACATTAGGCCTATTCTGTATGTTGAATTGATGAAGATTTTAAAAATACATTA
TTACAGATGATAGTTTTTTAGTTTTACACCTTTTTCTCTGACTCTAAAGCTAATTGATAT
GTACAGAGAAATGTAACCAAAAAAAGAGAAGGTGGCTGTTTTTAAATCTAAGTTTTTGTA
TTTAGCCAGCAAACACAGCATGCCTGTTGTGACTCCAGCTGTGTTGTCAGATGCTGTGAA
AAAAGAATAAATAAGAATAAATGGACATAGCCACTCCTAAGAAGTCTAGAATTTTGTTGG
AGAAATAAGACCTGCAAAAACTATTTAAGAGAAAGACAGTAGTAGGAGTTCCATTATGGC
TCAGTGATTAACAAATCTGACTAGCATCCATGAGGACAAAGGTTCGATCCCTGTGCTCAG
AGGGTTAAGGATCTGACGTTGCAGACTTGGCTTGGATCCTGCATTGCTGTAGCTGTGGTG
TAGGCCAGCAGCTACAGCTCTGATTTGACCCCTAGCCGGAGAACCTCCATATGCCGTGGG
------------AAGCAAAAAAAACCAAAAACAAAACAACAACAACAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               18-368, gnl|bosTau2|chr22 (12132650-12133001)
               

               
               18-368, gnl|Hg17|chr3 (10136340-10136680)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-368, gnl|bosTau2|chr22 (12132650-12133001)
               

               
               18-368, gnl|Hg17|chr3 (10136340-10136680)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               thg (0.253582)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.253582)
               

               
               eep (0.122564)

	18-368, gnl\|bosTau2\|chr22 (12132650-12133001)
	18-368, gnl\|Hg17\|chr3 (10136340-10136680)