Non-Coding RNA Search

Ss1.1-rthg30_d1.5

Sequence:


               
               TTGATGTTTCAATTTAAAGAAAGATCTACTTATGATATTTGACTATTTTTGCAGCATCTT
CCAAACAATCTCCTCTCATAATCCAGCAAAAAGAGAAACTGTGTCTGGGACCTCATCATT
CTTGTCCAAAGAATTGGGTTTGGTTCCGATGCAATTGTTACTACATCTCCAAGGAAGAGT
TAACTTGGAAAGACAGTCAACGTGCCTGTTCATCTCTAAATTCCAGTCTCATTAGGATAA
ACAGAGAGGAGATGCATTTCTTCTCTTTAAAATATTTCTTTTGGATTGGAGTCTACTACA
ATGGGATTGACCGGCACTGGTTGTGGGAAAATGATTCACTTCTGCCCTCTGATATGTTTG
ATCTTCCTACACCTCAATCACTACAGGCCTGTCTATCTTACAGATCAAGAGAAGCTTATG
AAAGTGAAAGCTGTGAAAGAAAACAGAACTACATTTGTAAGAATCACCTTATTTATTCCA
TAAATTCACAGGAAAGATAAGCATTACTCTTATCTAACCTTATGTCTTGATAGACTTGCC
AGTGGTCACTTTCTTATTCTATCTAGAAAATATGTAAATTTACATCTTGGGTTTAATAAA
AATAGAATCTGCTAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGATGTTTCAATTTAAAGAAAGATCTACTTATGATATTTGACTATTTTTGCAGCATCTT
CCAAACAATCTCCTCTCATAATCCAGCAAAAAGAGAAACTGTGTCTGGGACCTCATCATT
CTTGTCCAAAGAATTGGGTTTGGTTCCGATGCAATTGTTACTACATCTCCAAGGAAGAGT
TAACTTGGAAAGACAGTCAACGTGCCTGTTCATCTCTAAATTCCAGTCTCATTAGGATAA
ACAGAGAGGAGATGCATTTCTTCTCTTTAAAATATTTCTTTTGGATTGGAGTCTACTACA
ATGGGATTGACCGGCACTGGTTGTGGGAAAATGATTCACTTCTGCCCTCTGATATGTTTG
ATCTTCCTACACCTCAATCACTACAGGCCTGTCTATCTTACAGATCAAGAGAAGCTTATG
AAAGTGAAAGCTGTGAAAGAAAACAGAACTACATTTGTAAGAATCACCTTATTTATTCCA
TAAATTCACAGGAAAGATAAGCATTACTCTTATCTAACCTTATGTCTTGATAGACTTGCC
AGTGGTCACTTTCTTATTCTATCTAGAAAATATGTAAATTTACATCTTGGGTTTAATAAA
AATAGAATCTGCTAAAAAAAAAAA

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               92-254, gnl|bosTau2|chr5 (58361833-58361668)
               

               
               92-254, gnl|Hg17|chr12 (10355333-10355481)
               

               
               92-254, gnl|Mm7|chr6 (129606384-129606546)
               


               
               460-618, gnl|bosTau2|chr5 (58356666-58356513)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               92-254, gnl|bosTau2|chr5 (58361833-58361668)
               

               
               92-254, gnl|Hg17|chr12 (10355333-10355481)
               

               
               92-254, gnl|Mm7|chr6 (129606384-129606546)
               


               
               460-618, gnl|bosTau2|chr5 (58356666-58356513)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lnt (0.142308)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)
               

               
               thg (0.126791)

	92-254, gnl\|bosTau2\|chr5 (58361833-58361668)
	92-254, gnl\|Hg17\|chr12 (10355333-10355481)
	92-254, gnl\|Mm7\|chr6 (129606384-129606546)

	460-618, gnl\|bosTau2\|chr5 (58356666-58356513)