Non-Coding RNA Search

Ss1.1-rthg31_n9.5

Sequence:


               
               TGGAATATTATAACTGGAAGAATAGAAAAGGACTTTGTCTGTCACCAGGATACAGTACTT
TCTTGTGATATTTCTCCTGATGCTACCAAATTTTCTTCTACCTCTGCTGACAAAACTGCA
AAGATTTGGAGTTTTGACCTCCTTTCCCCTCTTCATGAATTGAGAGGCCACAAAGGCTGC
GTGCGCTGCTCTGCCTTCTCCGTGGACAGTACCCTGTTGGCGACTGGAGATGACAACGGA
GAAATCAGGATATGGAATGTCTCAAACGGTGAGCTTCTTCATTCGTGTGCTCCAGTCTTA
GTAGAAGGAGGAGCTGCTACCCACGGAGGCTGGGTGACCGACCTTCGCTTTTCTCCAGAT
GGCAAAATGCTTGTTTCTGCTGGAGGGTATCTTAAGTGGTGGAATGTTGACTCTGGGAAA
TCCATACAGACGTTCTACACAAATGGAACCAATCTTAAGAAAATACATGTGTCCCCTGAC
TTCAAAACATATGTGACTGTGGATAATCTTGGTATTCTGTATGTTTTAAAGATTTTAGAG
TAAAATAGTTGAGCAGTGATGCAAGTTGAACTCTTAATTTTGAATTGGAAAAAATCGTAA
TGAAACTCTGTATTTCAACTTTTTTTATAAAGCTGTGAATTGTTTTGCAGTATTGCATTC
ATTACAAAAGTATTTGTGGTTGGATGAATAATATTAATGTAGCTTTTCCCAAATGAACAC
ACTTTTAATCTTGTTTTTCATAATCATCATCATTATTTTTAACAGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAATATTATAACTGGAAGAATAGAAAAGGACTTTGTCTGTCACCAGGATACAGTACTT
TCTTGTGATATTTCTCCTGATGCTACCAAATTTTCTTCTACCTCTGCTGACAAAACTGCA
AAGATTTGGAGTTTTGACCTCCTTTCCCCTCTTCATGAATTGAGAGGCCACAAAGGCTGC
GTGCGCTGCTCTGCCTTCTCCGTGGACAGTACCCTGTTGGCGACTGGAGATGACAACGGA
GAAATCAGGATATGGAATGTCTCAAACGGTGAGCTTCTTCATTCGTGTGCTCCAGTCTTA
GTAGAAGGAGGAGCTGCTACCCACGGAGGCTGGGTGACCGACCTTCGCTTTTCTCCAGAT
GGCAAAATGCTTGTTTCTGCTGGAGGGTATCTTAAGTGGTGGAATGTTGACTCTGGGAAA
TCCATACAGACGTTCTACACAAATGGAACCAATCTTAAGAAAATACATGTGTCCCCTGAC
TTCAAAACATATGTGACTGTGGATAATCTTGGTATTCTGTATGTTTTAAAGATTTTAGAG
TAAAATAGTTGAGCAGTGATGCAAGTTGAACTCTTAATTTTGAATTGGAAAAAATCGTAA
TGAAACTCTGTATTTCAACTTTTTTTATAAAGCTGTGAATTGTTTTGCAGTATTGCATTC
ATTACAAAAGTATTTGTGGTTGGATGAATAATATTAATGTAGCTTTTCCCAAATGAACAC
ACTTTTAATCTTGTTTTTCATAATCATCATCATTATTTTTAACAGTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               249-405, gnl|bosTau2|chr5 (39222224-39222380)
               

               
               249-405, gnl|Hg17|chr12 (97623418-97623571)
               

               
               249-405, gnl|Mm7|chr10 (90554567-90554411)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               249-405, gnl|bosTau2|chr5 (39222224-39222380)
               

               
               249-405, gnl|Hg17|chr12 (97623418-97623571)
               

               
               249-405, gnl|Mm7|chr10 (90554567-90554411)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	249-405, gnl\|bosTau2\|chr5 (39222224-39222380)
	249-405, gnl\|Hg17\|chr12 (97623418-97623571)
	249-405, gnl\|Mm7\|chr10 (90554567-90554411)