Non-Coding RNA Search

Ss1.1-rthg33_b19.5

Sequence:


               
               ACACACCAGAGTGATGCTCTGGAGTCATCTTCCACAGTAATGACTCTTAGTCTTGTTCCG
GAGAGGCGCAGGAAAGAAGTGTCCCTAGCTGTTGCCTTTCGGGATTAGCTACTGTTCTGC
TGGCTTTAAAACTTGGATGATTCAAGACTGGTCAGATGGCAGTAGCTTGTCTTGAAGAAG
AATGTTAAGCCCTTTATTCAGAAACATAAATTTTAATCTCATTCCTGGCCCTACGCTATC
AAAGGATGCCATTTCCTGGAGAAGACAGTGTCCTGATAGGCCTTTGTGGAGAATTTTCTT
TTACAAATAAGTCACTTCTTTCTATAAATTTTTTTAAAAATATTGGACCAAGTGAAACCT
TTCGGGACAGCTTCATCCTGTTATATTTTATATGGTTTCTGTTCTAAGATCTCAGAACAC
CTTGAAAAAGAGATGCTGTTTAAATGCATCCTTATTTTTTTTAATAGGGCATTTAAAATC
ACTGTGAGAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACACCAGAGTGATGCTCTGGAGTCATCTTCCACAGTAATGACTCTTAGTCTTGTTCCG
GAGAGGCGCAGGAAAGAAGTGTCCCTAGCTGTTGCCTTTCGGGATTAGCTACTGTTCTGC
TGGCTTTAAAACTTGGATGATTCAAGACTGGTCAGATGGCAGTAGCTTGTCTTGAAGAAG
AATGTTAAGCCCTTTATTCAGAAACATAAATTTTAATCTCATTCCTGGCCCTACGCTATC
AAAGGATGCCATTTCCTGGAGAAGACAGTGTCCTGATAGGCCTTTGTGGAGAATTTTCTT
TTACAAATAAGTCACTTCTTTCTATAAATTTTTTTAAAAATATTGGACCAAGTGAAACCT
TTCGGGACAGCTTCATCCTGTTATATTTTATATGGTTTCTGTTCTAAGATCTCAGAACAC
CTTGAAAAAGAGATGCTGTTTAAATGCATCCTTATTTTTTTTAATAGGGCATTTAAAATC
ACTGTGAGAGCA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-478, gnl|bosTau2|chr1 (80915174-80914687)
               

               
               1-478, gnl|Hg17|chr3 (142940514-142941034)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-478, gnl|bosTau2|chr1 (80915174-80914687)
               

               
               1-478, gnl|Hg17|chr3 (142940514-142941034)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               duo (0.172801)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)
               

               
               thg (0.126791)

	1-478, gnl\|bosTau2\|chr1 (80915174-80914687)
	1-478, gnl\|Hg17\|chr3 (142940514-142941034)