Non-Coding RNA Search

Ss1.1-rthg34_b9.5

Sequence:


               
               GTGCCATTTTTTTTTGTTCAAATGATTTTAATTATTGGAATGCACAATTTTTTTAATATG
CAAATAAAAAAAATAATAAACCAAAACTACTTGTTTCAATTCTTTGGGAGATTTAATGAA
AACTGCTGTCCAGTGTTATGAAGCTCTCTAAAACAAGGAGAGGAGTGAGAGTACACTAAG
AAAGAACCATCGTATAAATCTCATGGAGAAATAATTTCCCCAATTAATATTGATTACTTA
CCCAAACAACAAAAGTTTAAAGAATATGATAAAGTTGATAGGTAGAATATTTTAAAGGGG
GAAAAAGAAATTTCTGTGTGTTTATGAGTCCAGTTAATACATGGAGTTTGCTGCCAATTA
AGGCTGTAGGATCAGTGAGCTTGCTAAGTTTCAATTAGATGCTTGCTAGAATTAAAATGA
AAAGGACTGTTAATTTTGAGACCTCATGACATTAGGTGAACTTAGATACAAATATCTTCC
CTCCTGGAGTATTTTTTTTTTTTGGAAAAGAATTTCACTTTAGCCTAAGCAATTAAACCA
TAGTGTCTAAGGTACTATTGCCAAATTTGGGGGAACGATGGACCATACAGAAGATGAAAA
TCCTGAAACAAATTTTTCTGCTAATAGTTCCATGTCTCAGATACTNAAATTAATTTATAG
AAATTAAATCATATTCGCTTTGTT------------CTTGATGAATATTTGAGTAATTTG
CTATACCATTGGTTTGATTTTTTA------------CCTATATAAAATAAAATATGAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCCATTTTTTTTTGTTCAAATGATTTTAATTATTGGAATGCACAATTTTTTTAATATG
CAAATAAAAAAAATAATAAACCAAAACTACTTGTTTCAATTCTTTGGGAGATTTAATGAA
AACTGCTGTCCAGTGTTATGAAGCTCTCTAAAACAAGGAGAGGAGTGAGAGTACACTAAG
AAAGAACCATCGTATAAATCTCATGGAGAAATAATTTCCCCAATTAATATTGATTACTTA
CCCAAACAACAAAAGTTTAAAGAATATGATAAAGTTGATAGGTAGAATATTTTAAAGGGG
GAAAAAGAAATTTCTGTGTGTTTATGAGTCCAGTTAATACATGGAGTTTGCTGCCAATTA
AGGCTGTAGGATCAGTGAGCTTGCTAAGTTTCAATTAGATGCTTGCTAGAATTAAAATGA
AAAGGACTGTTAATTTTGAGACCTCATGACATTAGGTGAACTTAGATACAAATATCTTCC
CTCCTGGAGTATTTTTTTTTTTTGGAAAAGAATTTCACTTTAGCCTAAGCAATTAAACCA
TAGTGTCTAAGGTACTATTGCCAAATTTGGGGGAACGATGGACCATACAGAAGATGAAAA
TCCTGAAACAAATTTTTCTGCTAATAGTTCCATGTCTCAGATACTNAAATTAATTTATAG
AAATTAAATCATATTCGCTTTGTT------------CTTGATGAATATTTGAGTAATTTG
CTATACCATTGGTTTGATTTTTTA------------CCTATATAAAATAAAATATGAAGA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               100-548, gnl|bosTau2|chr15 (41158414-41158857)
               

               
               100-548, gnl|Hg17|chr11 (36569963-36569479)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-548, gnl|bosTau2|chr15 (41158414-41158857)
               

               
               100-548, gnl|Hg17|chr11 (36569963-36569479)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.253582)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.253582)

	100-548, gnl\|bosTau2\|chr15 (41158414-41158857)
	100-548, gnl\|Hg17\|chr11 (36569963-36569479)