Non-Coding RNA Search

Ss1.1-rton1204b_c23.5

Sequence:


               
               GAGGTGCTGGTGGGAGCTTCCTGGCCTCAGAGCTGAGTGGGAGGCTGAGGCACTGGGTAG
ATGCTTAAGAGCGGGTAGGCTAACTTCTTATAGTGGGGAGTGATAAAGCTGGCTGGGAAC
GGCATGAGTGGGGCTAGAAGAGGTGGAGACTGATCAGAATAATTCTGGAAAGGCTTGGGA
ACATTCTGTGCTTATGGAAAGAAGACCCCTGTGAGATATGAAAAGGCAAGGGTAAAAGAC
TCCAAACTCAAGTTTTCCTCTTGCCTCCTGGCCACATGTATGTGACTTTGGAGCATGGCC
CTGGCTCTGGAACCCACGACTCCCATACGATGGAGCTGGTGTAGAGCAGGTTTGGGCAGA
GCCCAAACTCAGATGTCTCCCAAAAAATTGTGATCCAGAATTTGAATTCTAAGATTCACA
AACTTCCCCCAACCCCCAGGGCTGCCAATTGTACAGATGTGCCTTCATTAAAGGATATAT
GCACGTTTGACTATGGGATGGGGAGGTAGAGTTCGGGCAGAGCTCTGGTTCAGGACTCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGTGCTGGTGGGAGCTTCCTGGCCTCAGAGCTGAGTGGGAGGCTGAGGCACTGGGTAG
ATGCTTAAGAGCGGGTAGGCTAACTTCTTATAGTGGGGAGTGATAAAGCTGGCTGGGAAC
GGCATGAGTGGGGCTAGAAGAGGTGGAGACTGATCAGAATAATTCTGGAAAGGCTTGGGA
ACATTCTGTGCTTATGGAAAGAAGACCCCTGTGAGATATGAAAAGGCAAGGGTAAAAGAC
TCCAAACTCAAGTTTTCCTCTTGCCTCCTGGCCACATGTATGTGACTTTGGAGCATGGCC
CTGGCTCTGGAACCCACGACTCCCATACGATGGAGCTGGTGTAGAGCAGGTTTGGGCAGA
GCCCAAACTCAGATGTCTCCCAAAAAATTGTGATCCAGAATTTGAATTCTAAGATTCACA
AACTTCCCCCAACCCCCAGGGCTGCCAATTGTACAGATGTGCCTTCATTAAAGGATATAT
GCACGTTTGACTATGGGATGGGGAGGTAGAGTTCGGGCAGAGCTCTGGTTCAGGACTCAC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               9-539, gnl|bosTau2|chr10 (23720238-23719699)
               

               
               9-539, gnl|Hg17|chr15 (38412602-38412053)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-539, gnl|bosTau2|chr10 (23720238-23719699)
               

               
               9-539, gnl|Hg17|chr15 (38412602-38412053)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ton (0.1755)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)
               

               
               cty (0.10408)

	9-539, gnl\|bosTau2\|chr10 (23720238-23719699)
	9-539, gnl\|Hg17\|chr15 (38412602-38412053)