Ss1.1-rton1207b_b14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGACAGCTGGAACAGGAGAAGAAGGGCTGTGGACCAGCACCTGGATCAAGAGCTAACA AAGAGAGATGAACACCTGGAAAAGAAAGGGGAGCAGCTGCTGGAGCAGCAGGAGAAGCCT CTAGAGCCAGCAGAGCAGCAGGAGGGGCAGTTGAAACAGCCTGTGCTTATTCCAGCTCCT GGCCAGGTCCAGGAGACCCACCCAGTCCAACTGCTGAAGGGAGAAGTTTTGCCCCCTGAG GAAGCAGGACATAAGTAACCACCTCTGGACATAAGTAACCACCCCCAGTATCCCAGAGGC CCCCGGAAATCCCGCACAAATGAAGAGAGAGCCAGTGGCCTCACTTACCTCAGGTCCCCA GCCTGGGTGGCCTGCCTCATCTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGACAGCTGGAACAGGAGAAGAAGGGCTGTGGACCAGCACCTGGATCAAGAGCTAACA AAGAGAGATGAACACCTGGAAAAGAAAGGGGAGCAGCTGCTGGAGCAGCAGGAGAAGCCT CTAGAGCCAGCAGAGCAGCAGGAGGGGCAGTTGAAACAGCCTGTGCTTATTCCAGCTCCT GGCCAGGTCCAGGAGACCCACCCAGTCCAACTGCTGAAGGGAGAAGTTTTGCCCCCTGAG GAAGCAGGACATAAGTAACCACCTCTGGACATAAGTAACCACCCCCAGTATCCCAGAGGC CCCCGGAAATCCCGCACAAATGAAGAGAGAGCCAGTGGCCTCACTTACCTCAGGTCCCCA GCCTGGGTGGCCTGCCTCATCTGT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 133-242, - strand, RNAz p=0.994376 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 133-242, - strand, RNAz p=0.994376 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 3-131, gnl|bosTau2|chr3 (14254667-14254793) | |
| 3-131, gnl|Hg17|chr1 (149696838-149696973) | |
| 3-131, gnl|Mm7|chr3 (92677512-92677379) | |
| 133-384, gnl|bosTau2|chr3 (14254766-14255015) | |
| 133-384, gnl|Hg17|chr1 (149696946-149697206) | |
| 133-384, gnl|Mm7|chr3 (92677405-92677175) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-131, gnl|bosTau2|chr3 (14254667-14254793) | |
| 3-131, gnl|Hg17|chr1 (149696838-149696973) | |
| 3-131, gnl|Mm7|chr3 (92677512-92677379) | |
| 133-384, gnl|bosTau2|chr3 (14254766-14255015) | |
| 133-384, gnl|Hg17|chr1 (149696946-149697206) | |
| 133-384, gnl|Mm7|chr3 (92677405-92677175) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ton (0.1755) | |
| eye (0.170503) |