Ss1.1-rton1212b_p6.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGACCACTACCTTCTCCATGCTCTACATTGATAATCCAGTGGGCACAGGCTTCAGTTTT ACCGACCATCCCCAGGGATATGCAGTCGATGAGGATGATGTGGCTCGAGATTTATACAGT GCACTAATTCAGTTTTTCCTGCTGTTTTCTGACTATAAAGAGAATGACTTTTATGCCACT GGAGAGTCTTACGCCGGGAAGTACGTGCCCGCCCTCGCTCACTACATCCACGCGCTCAAC CCCGCGGTGACCCTGAAGATCAACCTGAAGGGCATCGCTCTCGGAGACGCATATTTTGAT CCCGAGTCAGTCATAGGGGGCTACGCGCCATTCCTGTTCCACATCGGCTTGTTGGACGAG AAGCAGAGAAAGTACTTCCAGAAGCAGTGCGACGTGTGCGTGAAATACATCCAGGAGGAG AAGTGGTCTCAAGCCTTTGAATTACTGGATAAACTACTAGATGGTGGCTTAACAAGAGAG CCTTCTTACTTCCAGAATGTTACAGGATGTCCTAATTACTACAACCTTTTACAGTGCACG GAACCTGAGGACCAGAGCTACTATGGGAAATTTTTGTCCCTCCCACAAGTGAGACAAGCC ATCCATGTGGGAAACCGGACTTTTAGTGATGGATCCAAAGTTGAAAAGTACTTGCGAGAA GATACAGTCAAGTCTGTGAAACCGTGGTTGACTGAAATCATGAATAATTATAAGGTTCTA ATCTACAATGGCCAATTGGACATCATCTTGGCAGCTTCCCTGACCGAGCGCTCCTTGATG GCCATGAACTGGAAAGGATCCCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGACCACTACCTTCTCCATGCTCTACATTGATAATCCAGTGGGCACAGGCTTCAGTTTT ACCGACCATCCCCAGGGATATGCAGTCGATGAGGATGATGTGGCTCGAGATTTATACAGT GCACTAATTCAGTTTTTCCTGCTGTTTTCTGACTATAAAGAGAATGACTTTTATGCCACT GGAGAGTCTTACGCCGGGAAGTACGTGCCCGCCCTCGCTCACTACATCCACGCGCTCAAC CCCGCGGTGACCCTGAAGATCAACCTGAAGGGCATCGCTCTCGGAGACGCATATTTTGAT CCCGAGTCAGTCATAGGGGGCTACGCGCCATTCCTGTTCCACATCGGCTTGTTGGACGAG AAGCAGAGAAAGTACTTCCAGAAGCAGTGCGACGTGTGCGTGAAATACATCCAGGAGGAG AAGTGGTCTCAAGCCTTTGAATTACTGGATAAACTACTAGATGGTGGCTTAACAAGAGAG CCTTCTTACTTCCAGAATGTTACAGGATGTCCTAATTACTACAACCTTTTACAGTGCACG GAACCTGAGGACCAGAGCTACTATGGGAAATTTTTGTCCCTCCCACAAGTGAGACAAGCC ATCCATGTGGGAAACCGGACTTTTAGTGATGGATCCAAAGTTGAAAAGTACTTGCGAGAA GATACAGTCAAGTCTGTGAAACCGTGGTTGACTGAAATCATGAATAATTATAAGGTTCTA ATCTACAATGGCCAATTGGACATCATCTTGGCAGCTTCCCTGACCGAGCGCTCCTTGATG GCCATGAACTGGAAAGGATCCCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 185-311, gnl|bosTau2|chr4 (38579569-38579443) | |
| 185-311, gnl|canFam2|chr14 (45067860-45067998) | |
| 185-311, gnl|dasNov1|scaffold_2334 (30128-29996) | |
| 185-311, gnl|echTel1|scaffold_284366 (131768-131636) | |
| 185-311, gnl|fr1|chrUn (103568209-103568077) | |
| 185-311, gnl|hg17|chr7 (28885151-28885283) | |
| 185-311, gnl|Hg17|chr7 (28885281-28885155) | |
| 185-311, gnl|loxAfr1|scaffold_1419 (67190-67058) | |
| 185-311, gnl|mm7|chr6 (53895776-53895908) | |
| 185-311, gnl|Mm7|chr6 (53895906-53895780) | |
| 185-311, gnl|monDom2|scaffold_7 (91086684-91086552) | |
| 185-311, gnl|oryCun1|scaffold_174312 (185801-185915) | |
| 185-311, gnl|panTro1|chr6 (30022510-30022642) | |
| 185-311, gnl|rheMac2|chr3 (97132615-97132483) | |
| 185-311, gnl|rn3|chr4 (82585489-82585621) | |
| 185-311, gnl|tetNig1|chr8 (6547541-6547414) | |
| 185-311, gnl|xenTro1|scaffold_29 (2973630-2973762) | |
| 535-716, gnl|bosTau2|chr4 (38570578-38570397) | |
| 535-716, gnl|canFam2|chr14 (45060220-45060400) | |
| 535-716, gnl|dasNov1|scaffold_2334 (34925-34745) | |
| 535-716, gnl|echTel1|scaffold_284626 (16069-16249) | |
| 535-716, gnl|fr1|chrUn (103568929-103568752) | |
| 535-716, gnl|hg17|chr7 (28876914-28877094) | |
| 535-716, gnl|Hg17|chr7 (28877096-28876915) | |
| 535-716, gnl|loxAfr1|scaffold_103477 (5230-5050) | |
| 535-716, gnl|mm7|chr6 (53888500-53888680) | |
| 535-716, gnl|Mm7|chr6 (53888682-53888501) | |
| 535-716, gnl|monDom2|scaffold_7 (91092124-91091944) | |
| 535-716, gnl|oryCun1|scaffold_174312 (177579-177760) | |
| 535-716, gnl|panTro1|chr6 (30014291-30014471) | |
| 535-716, gnl|rheMac2|chr3 (97140256-97140076) | |
| 535-716, gnl|rn3|chr4 (82578654-82578834) | |
| 535-716, gnl|tetNig1|chr8 (6548214-6548036) | |
| 535-716, gnl|xenTro1|scaffold_29 (2963281-2963461) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 185-311, gnl|bosTau2|chr4 (38579569-38579443) | |
| 185-311, gnl|canFam2|chr14 (45067860-45067998) | |
| 185-311, gnl|dasNov1|scaffold_2334 (30128-29996) | |
| 185-311, gnl|echTel1|scaffold_284366 (131768-131636) | |
| 185-311, gnl|fr1|chrUn (103568209-103568077) | |
| 185-311, gnl|hg17|chr7 (28885151-28885283) | |
| 185-311, gnl|Hg17|chr7 (28885281-28885155) | |
| 185-311, gnl|loxAfr1|scaffold_1419 (67190-67058) | |
| 185-311, gnl|mm7|chr6 (53895776-53895908) | |
| 185-311, gnl|Mm7|chr6 (53895906-53895780) | |
| 185-311, gnl|monDom2|scaffold_7 (91086684-91086552) | |
| 185-311, gnl|oryCun1|scaffold_174312 (185801-185915) | |
| 185-311, gnl|panTro1|chr6 (30022510-30022642) | |
| 185-311, gnl|rheMac2|chr3 (97132615-97132483) | |
| 185-311, gnl|rn3|chr4 (82585489-82585621) | |
| 185-311, gnl|tetNig1|chr8 (6547541-6547414) | |
| 185-311, gnl|xenTro1|scaffold_29 (2973630-2973762) | |
| 535-716, gnl|bosTau2|chr4 (38570578-38570397) | |
| 535-716, gnl|canFam2|chr14 (45060220-45060400) | |
| 535-716, gnl|dasNov1|scaffold_2334 (34925-34745) | |
| 535-716, gnl|echTel1|scaffold_284626 (16069-16249) | |
| 535-716, gnl|fr1|chrUn (103568929-103568752) | |
| 535-716, gnl|hg17|chr7 (28876914-28877094) | |
| 535-716, gnl|Hg17|chr7 (28877096-28876915) | |
| 535-716, gnl|loxAfr1|scaffold_103477 (5230-5050) | |
| 535-716, gnl|mm7|chr6 (53888500-53888680) | |
| 535-716, gnl|Mm7|chr6 (53888682-53888501) | |
| 535-716, gnl|monDom2|scaffold_7 (91092124-91091944) | |
| 535-716, gnl|oryCun1|scaffold_174312 (177579-177760) | |
| 535-716, gnl|panTro1|chr6 (30014291-30014471) | |
| 535-716, gnl|rheMac2|chr3 (97140256-97140076) | |
| 535-716, gnl|rn3|chr4 (82578654-82578834) | |
| 535-716, gnl|tetNig1|chr8 (6548214-6548036) | |
| 535-716, gnl|xenTro1|scaffold_29 (2963281-2963461) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ton (0.1755) |