Non-Coding RNA Search

Ss1.1-rton1215b_c21.5

Sequence:


               
               GTCAGATTGAGAACCTCAAGAAGCAGAATGCCAACTTGCAGGCCGCTGTGGCCGATGCCG
AGCATCGTGGTGAGCTGGCCCTCAAGGACGCTCAGGCCAAGCTGGTCGAGCTGGAGGCCG
CTCTGAGAACTGCCAAGCAGGACCTGGCACGGCTGCTGCGCGAGTACCAGGAGCTGATGA
GCTTGAAGCTGGCCCTGGATGTGGAGATCGCCACCTACCGCAGGCTGCTGGAGGGCGAGG
AAAGCAGGATGTCTGGGGAATGCGCCAGTCAGGTCACTATCTCCGTTGGAGGGGGCAATG
CCATTGTGTCTGGAGGAGCAGATGGTGGTCTGGTGGGCACTTGCGGCCTTGGAGGCGAGA
AGGGCAGTGTTGGGTCTAGATGTTCCAGCATCGTGACTGGAGGCTCCAGTGTTGTGACCG
GGGGCTCCAGCATCTCGACCAGGGGCTCCAGCATGGTCACCAAGGGCTCCAATGTCATCG
TGGTCTCTGGGCAGAGCCCTGCTTTGGGCTCCAGCTCTGTGCCTGGCTCTGGCTCCAGCT
CCAGCTCCACCTCCAGCTTTACCTCTCGCACCATCCTGAAGAAGACGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCAGATTGAGAACCTCAAGAAGCAGAATGCCAACTTGCAGGCCGCTGTGGCCGATGCCG
AGCATCGTGGTGAGCTGGCCCTCAAGGACGCTCAGGCCAAGCTGGTCGAGCTGGAGGCCG
CTCTGAGAACTGCCAAGCAGGACCTGGCACGGCTGCTGCGCGAGTACCAGGAGCTGATGA
GCTTGAAGCTGGCCCTGGATGTGGAGATCGCCACCTACCGCAGGCTGCTGGAGGGCGAGG
AAAGCAGGATGTCTGGGGAATGCGCCAGTCAGGTCACTATCTCCGTTGGAGGGGGCAATG
CCATTGTGTCTGGAGGAGCAGATGGTGGTCTGGTGGGCACTTGCGGCCTTGGAGGCGAGA
AGGGCAGTGTTGGGTCTAGATGTTCCAGCATCGTGACTGGAGGCTCCAGTGTTGTGACCG
GGGGCTCCAGCATCTCGACCAGGGGCTCCAGCATGGTCACCAAGGGCTCCAATGTCATCG
TGGTCTCTGGGCAGAGCCCTGCTTTGGGCTCCAGCTCTGTGCCTGGCTCTGGCTCCAGCT
CCAGCTCCACCTCCAGCTTTACCTCTCGCACCATCCTGAAGAAGACGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-248, gnl|bosTau2|chr5 (19881474-19881249)
               

               
               23-248, gnl|Hg17|chr12 (51094230-51094011)
               

               
               23-248, gnl|Mm7|chr15 (101541641-101541416)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-248, gnl|bosTau2|chr5 (19881474-19881249)
               

               
               23-248, gnl|Hg17|chr12 (51094230-51094011)
               

               
               23-248, gnl|Mm7|chr15 (101541641-101541416)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ton (0.877501)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.877501)

	23-248, gnl\|bosTau2\|chr5 (19881474-19881249)
	23-248, gnl\|Hg17\|chr12 (51094230-51094011)
	23-248, gnl\|Mm7\|chr15 (101541641-101541416)