Non-Coding RNA Search

Ss1.1-rton1215b_n7.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTGCAGTTAAAATTTTATTTCATTCATGTCAGGTATAACAAGTG
CAACTTGAATGTACAAATTCTGAACAAAACAAAAAACAAACAAAAAAACAACGAAAAACT
TTTTTAAAAGCAGATTCATGCAAAGAAATGAATGGGGCACTGCACTGCACTGCAGATGTC
ATGGACCCTCTTTTACTGTGTATTATGACAAAAACAAAGGACCATTCATAGACTTCCAAT
GGGGGTATCAAGGGAATTCTATATGAGGGGGGGGGGAAAAAAAAAGAGAGAGAGCAACTA
AGGAGAGAGGTGGAACTTTCCCCAGAATTCAGACAACATGCTACAAACTTACTTTCTACT
TTTAAAACAGTCCTTGAATAAATATCCAATCCTGCAATTAGCATTTACACACACAGGCTG
ATAAAATAATTTACCTTTTGCATTGGAAATGCATTCTTGCAAAAGAAACACTACCAGCTA
CCAGTTTATAGATAATCAAAGGCTTTCATTTANAGTGCATCTGTAACG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTGCAGTTAAAATTTTATTTCATTCATGTCAGGTATAACAAGTG
CAACTTGAATGTACAAATTCTGAACAAAACAAAAAACAAACAAAAAAACAACGAAAAACT
TTTTTAAAAGCAGATTCATGCAAAGAAATGAATGGGGCACTGCACTGCACTGCAGATGTC
ATGGACCCTCTTTTACTGTGTATTATGACAAAAACAAAGGACCATTCATAGACTTCCAAT
GGGGGTATCAAGGGAATTCTATATGAGGGGGGGGGGAAAAAAAAAGAGAGAGAGCAACTA
AGGAGAGAGGTGGAACTTTCCCCAGAATTCAGACAACATGCTACAAACTTACTTTCTACT
TTTAAAACAGTCCTTGAATAAATATCCAATCCTGCAATTAGCATTTACACACACAGGCTG
ATAAAATAATTTACCTTTTGCATTGGAAATGCATTCTTGCAAAAGAAACACTACCAGCTA
CCAGTTTATAGATAATCAAAGGCTTTCATTTANAGTGCATCTGTAACG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               18-525, gnl|bosTau2|chr9 (38622939-38622443)
               

               
               18-525, gnl|Hg17|chr6 (130504276-130503802)
               

               
               18-525, gnl|Mm7|chr10 (26026656-26027124)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-525, gnl|bosTau2|chr9 (38622939-38622443)
               

               
               18-525, gnl|Hg17|chr6 (130504276-130503802)
               

               
               18-525, gnl|Mm7|chr10 (26026656-26027124)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ton (0.1755)
               

               
               cbl (0.114797)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)
               

               
               cbl (0.114797)

	18-525, gnl\|bosTau2\|chr9 (38622939-38622443)
	18-525, gnl\|Hg17\|chr6 (130504276-130503802)
	18-525, gnl\|Mm7\|chr10 (26026656-26027124)