Non-Coding RNA Search

Ss1.1-rton1216b_h12.5

Sequence:


               
               TCATTTCTGGCGAGGCAAAGACAGGCCACCAGCACGAGAAGATCATACCCAGGCCACGTG
CAGCCAGCCACAGCAAGGTAGACAAGTCTTGCTGTTAGAATTTAAAAAAAACACCCTGAA
TTCAAAACATACTTCTGTTATGTATAACAACATTTCAGGAGATTCAGCCAGCTTATATTT
TGTCTCTCTTTTATGTTACTATTTAGTTGTTTCTCATTTGAGGACTTTCTCTCCTCCGTA
TCTATAATGTTTCAGTTTCTTGGTCCTTTATTCTGTAGTCCTTTCGGTTCCTTTAAATGT
GCCAAAAAATTTTTAAATGCCCAGTTAAAAGTGTTGTATATTAGTGTAGTACTTTTCTTT
GTATGAAAATGTCCTTTCCCCAATGGTGTAGGCTTTGTAATGAATTAGATTTTCTGCCAA
TAATTGATATACAATTTATATTCTTTATTGTGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCATTTCTGGCGAGGCAAAGACAGGCCACCAGCACGAGAAGATCATACCCAGGCCACGTG
CAGCCAGCCACAGCAAGGTAGACAAGTCTTGCTGTTAGAATTTAAAAAAAACACCCTGAA
TTCAAAACATACTTCTGTTATGTATAACAACATTTCAGGAGATTCAGCCAGCTTATATTT
TGTCTCTCTTTTATGTTACTATTTAGTTGTTTCTCATTTGAGGACTTTCTCTCCTCCGTA
TCTATAATGTTTCAGTTTCTTGGTCCTTTATTCTGTAGTCCTTTCGGTTCCTTTAAATGT
GCCAAAAAATTTTTAAATGCCCAGTTAAAAGTGTTGTATATTAGTGTAGTACTTTTCTTT
GTATGAAAATGTCCTTTCCCCAATGGTGTAGGCTTTGTAATGAATTAGATTTTCTGCCAA
TAATTGATATACAATTTATATTCTTTATTGTGAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-452, gnl|bosTau2|chr27 (24136454-24136899)
               

               
               1-452, gnl|Hg17|chr8 (42992718-42993162)
               

               
               1-452, gnl|Mm7|chr8 (24788459-24788036)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-452, gnl|bosTau2|chr27 (24136454-24136899)
               

               
               1-452, gnl|Hg17|chr8 (42992718-42993162)
               

               
               1-452, gnl|Mm7|chr8 (24788459-24788036)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sto (0.179824)
               

               
               ton (0.1755)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               ton (0.1755)

	1-452, gnl\|bosTau2\|chr27 (24136454-24136899)
	1-452, gnl\|Hg17\|chr8 (42992718-42993162)
	1-452, gnl\|Mm7\|chr8 (24788459-24788036)