Ss1.1-rton1217b_e7.5
|
CTATACCCCGGGCCTGGTCAGCCTCCTCCCACCTCCCCAGACACCGGACTTTCCTCCCAA
ACGAGCCCAAGGGGCTTGGCAAACCCACTCGATCATAAGGAGAAAGACCCAAGACCCTTC
CCACCAGCCCCCCTCCCGCTGTCCGGAGGGGTTTCAGAACCCTTGGTCCGGCTGTCCCCA
GGGCCCCTCCACCAGGTGGCTGTTGGGGACCAAAGCATGGGTCACTCTCCGGCAGGGCAG
GAGGGATGGCTCGTGCAGTTGATGGTGTCTGGAAGCTTCTCAGCTGGGAACCTTAGGGTG
CGGGTAGGCGGGCTCATCCGCTAAGCGTTTTCCGTTGAGCCGCTCCAAAAACACTAAACC
TGGGGATACCAGGTGCCCCCTCACCCCAGCTGCCCAGCTCCATCCCTGCCCCCACCCCAG
GATGGCCATCTTGGGTGGGGGGGCCTGGGAGGGGGTGTTAGGTGTTATAGGGTCACCAGG
TCAAGGACTCCTGTGACCTGGCTCCTGAAGTCAGCTCACGACGGCTGTTATCTGCTTGGC
AAATTATACCGGGATATATATCCCTTCCCCAGCCCTCCCCAGCCCTCCCCCCACCCCCTC
CTCTTTAAAAGAAAAAAAAGATACAAAAAAAAAAAACCTTAAAAAAATTCCATGTTTCCT
AATTTGCACGAAATTTTCTACCACATGATGTGCCTTGCCTTCCGAAAATAAGTATTACCT
TTAAACAATATCAGCGCACACAGATAGCTGCATGCACTGCTCGTGTAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTATACCCCGGGCCTGGTCAGCCTCCTCCCACCTCCCCAGACACCGGACTTTCCTCCCAA
ACGAGCCCAAGGGGCTTGGCAAACCCACTCGATCATAAGGAGAAAGACCCAAGACCCTTC
CCACCAGCCCCCCTCCCGCTGTCCGGAGGGGTTTCAGAACCCTTGGTCCGGCTGTCCCCA
GGGCCCCTCCACCAGGTGGCTGTTGGGGACCAAAGCATGGGTCACTCTCCGGCAGGGCAG
GAGGGATGGCTCGTGCAGTTGATGGTGTCTGGAAGCTTCTCAGCTGGGAACCTTAGGGTG
CGGGTAGGCGGGCTCATCCGCTAAGCGTTTTCCGTTGAGCCGCTCCAAAAACACTAAACC
TGGGGATACCAGGTGCCCCCTCACCCCAGCTGCCCAGCTCCATCCCTGCCCCCACCCCAG
GATGGCCATCTTGGGTGGGGGGGCCTGGGAGGGGGTGTTAGGTGTTATAGGGTCACCAGG
TCAAGGACTCCTGTGACCTGGCTCCTGAAGTCAGCTCACGACGGCTGTTATCTGCTTGGC
AAATTATACCGGGATATATATCCCTTCCCCAGCCCTCCCCAGCCCTCCCCCCACCCCCTC
CTCTTTAAAAGAAAAAAAAGATACAAAAAAAAAAAACCTTAAAAAAATTCCATGTTTCCT
AATTTGCACGAAATTTTCTACCACATGATGTGCCTTGCCTTCCGAAAATAAGTATTACCT
TTAAACAATATCAGCGCACACAGATAGCTGCATGCACTGCTCGTGTAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
6-312, gnl|bosTau2|chr7 (16249932-16250253) |
|
6-312, gnl|canFam2|chr20 (58989640-58989356) |
|
6-312, gnl|echTel1|scaffold_167104 (9776-9977) |
|
6-312, gnl|galGal2|chrUn (155818537-155818797) |
|
6-312, gnl|hg17|chr19 (3415641-3415902) |
|
6-312, gnl|Hg17|chr19 (3415656-3415944) |
|
6-312, gnl|loxAfr1|scaffold_50610 (3216-2918) |
|
6-312, gnl|mm7|chr10 (81191585-81191402) |
|
6-312, gnl|monDom2|scaffold_122 (1433078-1432696) |
|
6-312, gnl|rheMac2|chr19 (3299497-3299763) |
|
6-312, gnl|rn3|chr7 (9794840-9795020) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-312, gnl|bosTau2|chr7 (16249932-16250253) |
|
6-312, gnl|canFam2|chr20 (58989640-58989356) |
|
6-312, gnl|echTel1|scaffold_167104 (9776-9977) |
|
6-312, gnl|galGal2|chrUn (155818537-155818797) |
|
6-312, gnl|hg17|chr19 (3415641-3415902) |
|
6-312, gnl|Hg17|chr19 (3415656-3415944) |
|
6-312, gnl|loxAfr1|scaffold_50610 (3216-2918) |
|
6-312, gnl|mm7|chr10 (81191585-81191402) |
|
6-312, gnl|monDom2|scaffold_122 (1433078-1432696) |
|
6-312, gnl|rheMac2|chr19 (3299497-3299763) |
|
6-312, gnl|rn3|chr7 (9794840-9795020) |
|
ton (0.1755) |
|
hlv (0.139256) |
|
pla (0.133672) |
|
cov (0.132153) |
|
cty (0.10408) |
|
ton (0.1755) |
|
hlv (0.139256) |
|
pla (0.133672) |
|
cov (0.132153) |
|
cty (0.10408) |