Non-Coding RNA Search

Ss1.1-rton1218b_n4.5

Sequence:


               
               CTCAGGACGTCCCCTCAGCTCAGCTGTTTCGAAAGCCAAGATGAGCACCACTCCGGCCGA
GAAGTCCATGATGGACACGATCGACCTGTTCCACAAATTCACAGACGACAGTGACACCAT
GGACAAGGAGGGCCTGCTGAAGCTGCTGCAGGAGAATTTCCCCAACTTCCTCAGTGCCTG
TGACAAAAATGGTGTCGATTACCTGGCTAATATCTTTGAGCAAAAGGACAAGAATAAGGA
CCAGAGGATTGAGTTTTCTGAGTTTCTGTCCTTGCTGGGGGACATAGCCACGGGCTACCA
CAAACACAGCCATCAAGAAGAACTCTGTCCTCCGGAACATCAGTGAGCCCAGAGCCCTTC
AGAGAACCCAGGATACAATAAAATGTGCAAGATACAATAAAATGTCGTGTCCTCCCCGAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAGGACGTCCCCTCAGCTCAGCTGTTTCGAAAGCCAAGATGAGCACCACTCCGGCCGA
GAAGTCCATGATGGACACGATCGACCTGTTCCACAAATTCACAGACGACAGTGACACCAT
GGACAAGGAGGGCCTGCTGAAGCTGCTGCAGGAGAATTTCCCCAACTTCCTCAGTGCCTG
TGACAAAAATGGTGTCGATTACCTGGCTAATATCTTTGAGCAAAAGGACAAGAATAAGGA
CCAGAGGATTGAGTTTTCTGAGTTTCTGTCCTTGCTGGGGGACATAGCCACGGGCTACCA
CAAACACAGCCATCAAGAAGAACTCTGTCCTCCGGAACATCAGTGAGCCCAGAGCCCTTC
AGAGAACCCAGGATACAATAAAATGTGCAAGATACAATAAAATGTCGTGTCCTCCCCGAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55588494|ref|XP_524884.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55588494|ref|XP_524884.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               182-386, gnl|bosTau2|chr3 (11311579-11311783)
               

               
               182-386, gnl|Hg17|chr1 (150243519-150243307)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               182-386, gnl|bosTau2|chr3 (11311579-11311783)
               

               
               182-386, gnl|Hg17|chr1 (150243519-150243307)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ton (7.54651)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (7.54651)

	182-386, gnl\|bosTau2\|chr3 (11311579-11311783)
	182-386, gnl\|Hg17\|chr1 (150243519-150243307)