Non-Coding RNA Search

Ss1.1-rtra02_e11.5

Sequence:


               
               GCATATTGAGATCTGCACATCTGTGTAGGGACAAGAGACTTCTTTGGGATTCTGCTTAAA
CTTTAAGTTGAATTTGATTATAGTCATAATCATTTGTTCTGTGTATCTATCAGGTATATT
ATGTGCCAGGTGGTATTATATCCTGCCTTGAGATCGGAAGTCTCTTTCTTTTAAATTTGA
AATCTTACTGTGGCTCTTTTCTTTTCCTCCCTTAGATGAAAGCAGAGGAATCTGCCATCT
TCCAGCATTCTCTCTCTGTGTCCCTATTTTAACCGCTTGGTAATCTAGAATTATTTTGTT
CCACATACTATCTTTAAAAACTGACAGCAGCAGTTTCCCCCTACCCCAACCTTTTTAGGC
TCTATCTTTCACTGTGCTGGGTATAGAGACACTCAATGTGTGAGGATAGACAATTCTAAA
GTAACTATGCTATATATCAGGATTATGTGTTTTTGAACAATGTAGCTATTCCTATGGTAT
ACTGATATTAAGTGACATTTATTTTACACTAGTAATAGACCACTTACGTGGCTGATTTGA
AACCCTTTCTCTACAACGCACACATACACATCTAGCAGATCAGTGCTAAATAATTTCAAG
TTAAGGTAAGGTGCAATAAATAGACACATAGAACACAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCATATTGAGATCTGCACATCTGTGTAGGGACAAGAGACTTCTTTGGGATTCTGCTTAAA
CTTTAAGTTGAATTTGATTATAGTCATAATCATTTGTTCTGTGTATCTATCAGGTATATT
ATGTGCCAGGTGGTATTATATCCTGCCTTGAGATCGGAAGTCTCTTTCTTTTAAATTTGA
AATCTTACTGTGGCTCTTTTCTTTTCCTCCCTTAGATGAAAGCAGAGGAATCTGCCATCT
TCCAGCATTCTCTCTCTGTGTCCCTATTTTAACCGCTTGGTAATCTAGAATTATTTTGTT
CCACATACTATCTTTAAAAACTGACAGCAGCAGTTTCCCCCTACCCCAACCTTTTTAGGC
TCTATCTTTCACTGTGCTGGGTATAGAGACACTCAATGTGTGAGGATAGACAATTCTAAA
GTAACTATGCTATATATCAGGATTATGTGTTTTTGAACAATGTAGCTATTCCTATGGTAT
ACTGATATTAAGTGACATTTATTTTACACTAGTAATAGACCACTTACGTGGCTGATTTGA
AACCCTTTCTCTACAACGCACACATACACATCTAGCAGATCAGTGCTAAATAATTTCAAG
TTAAGGTAAGGTGCAATAAATAGACACATAGAACACAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-637, gnl|bosTau2|chr18 (13881570-13880947)
               

               
               1-637, gnl|Hg17|chr16 (67896954-67897623)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-637, gnl|bosTau2|chr18 (13881570-13880947)
               

               
               1-637, gnl|Hg17|chr16 (67896954-67897623)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               aor (0.195274)
               

               
               gul (0.177588)
               

               
               tra (0.123092)
               

               
               cty (0.10408)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               gul (0.177588)
               

               
               tra (0.123092)
               

               
               cty (0.10408)

	1-637, gnl\|bosTau2\|chr18 (13881570-13880947)
	1-637, gnl\|Hg17\|chr16 (67896954-67897623)