Non-Coding RNA Search

Ss1.1-rtra02_h17.5

Sequence:


               
               GAAAACCGAAGAAGAGAACCGGGTTCATGCGGAGATTGAAATATTCCTCAGAAAGGAGCA
GCAGATAAGGGAATATGAACAGGTCATCATTGAAGATCGTATAGAAAAGGAGAAGACCCG
GAAGAAGATACAACAAGATGACTTGGAATTAAAGAGCATCATAAAGCTCCAGGCTTGGTG
GCGAGGCATTGTGGTGCGGAGAGAAATCGGTGGTTTCAGAATGCCCAAGAAGGACAATGA
CAGCAAGGATATGAAAGGCAAAGGCGGAGGCAAGGACGAGCAGAGAGGCAAGAAGTGACC
ACGGTTCTGCTGTTCTGGAGATGGGAAGGAGGACCCGAAGGGAGCGAGAAACATCTTTTG
CCATCACAGGTACACCCGTATGTTGTTTGTCATTTGGACATTCCCAGGTGAGGTCTGGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAACCGAAGAAGAGAACCGGGTTCATGCGGAGATTGAAATATTCCTCAGAAAGGAGCA
GCAGATAAGGGAATATGAACAGGTCATCATTGAAGATCGTATAGAAAAGGAGAAGACCCG
GAAGAAGATACAACAAGATGACTTGGAATTAAAGAGCATCATAAAGCTCCAGGCTTGGTG
GCGAGGCATTGTGGTGCGGAGAGAAATCGGTGGTTTCAGAATGCCCAAGAAGGACAATGA
CAGCAAGGATATGAAAGGCAAAGGCGGAGGCAAGGACGAGCAGAGAGGCAAGAAGTGACC
ACGGTTCTGCTGTTCTGGAGATGGGAAGGAGGACCCGAAGGGAGCGAGAAACATCTTTTG
CCATCACAGGTACACCCGTATGTTGTTTGTCATTTGGACATTCCCAGGTGAGGTCTGGTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               165-420, gnl|bosTau2|chr1 (42712387-42712126)
               

               
               165-420, gnl|Hg17|chr3 (199104897-199104624)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               165-420, gnl|bosTau2|chr1 (42712387-42712126)
               

               
               165-420, gnl|Hg17|chr3 (199104897-199104624)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (0.29274)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               tra (0.123092)

	165-420, gnl\|bosTau2\|chr1 (42712387-42712126)
	165-420, gnl\|Hg17\|chr3 (199104897-199104624)