Non-Coding RNA Search

Ss1.1-rtra02_l15.5

Sequence:


               
               AGGAAAGTATTTTTAAATAGCCTAAGATTTGGGGCAATGTTTACTCCTTTTTCCCTATTT
ATCTGAATTACTGAATCTTACTTTATAAGGAACTGTCTGAAGAGCCAGGCAAATGGATAA
ATGATTTAATGAATTCTGAATTAAGGATATTTCACCCATTCTATAATAACTTATTTAAAT
TTTTACAAAATAAGCTTTCATCAAGACTTAAGACATAACTAACTTGAATTTATATACAAT
TTTAATTTAAAACTTCATGACTAGTCATTCTGATAGACTAGTTTGAAAGTGCATCTCATA
TAGTGTAGCTTAGATGAGGAGGATTCTGCTTTGTCAGTCATAGTGACACACAAAAAACAT
TGGATGGGTTATAAAGCTTAAGGCAGCAGAAGAAAACCTAAAGTTTCCTGTAAAGGAGAA
TTGTCAATATGTACTGTATAATAGCTTGATGTTTCTGGTGTGAGACTTGTCAAGGAAACA
TTGAGTAGCACAAAGAATGATGCCTTAAGCACTTCTGCTTCAGAAGGTAACAGTAGGAAG
TTATAAGCCCAGATGCAGGTGGTAAGACAGGCCTGGTTGGCTCCGGAAATGAAACGTAGC
CACAGGACATATCTTTCTAGGTGGCTTCAGAGTAATAGTTCAGTGTTAACTACTCTGCGG
TCTTTAATTTAGAATTAAGTAAAGTGAACATTAAAGAAAAAATAATTATATAATACCAGT
TTTATAGAAATTAACCTTTTGTTTTTAAAGTGCAGCCATCGTAGGTAATTGTATGAAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAAAGTATTTTTAAATAGCCTAAGATTTGGGGCAATGTTTACTCCTTTTTCCCTATTT
ATCTGAATTACTGAATCTTACTTTATAAGGAACTGTCTGAAGAGCCAGGCAAATGGATAA
ATGATTTAATGAATTCTGAATTAAGGATATTTCACCCATTCTATAATAACTTATTTAAAT
TTTTACAAAATAAGCTTTCATCAAGACTTAAGACATAACTAACTTGAATTTATATACAAT
TTTAATTTAAAACTTCATGACTAGTCATTCTGATAGACTAGTTTGAAAGTGCATCTCATA
TAGTGTAGCTTAGATGAGGAGGATTCTGCTTTGTCAGTCATAGTGACACACAAAAAACAT
TGGATGGGTTATAAAGCTTAAGGCAGCAGAAGAAAACCTAAAGTTTCCTGTAAAGGAGAA
TTGTCAATATGTACTGTATAATAGCTTGATGTTTCTGGTGTGAGACTTGTCAAGGAAACA
TTGAGTAGCACAAAGAATGATGCCTTAAGCACTTCTGCTTCAGAAGGTAACAGTAGGAAG
TTATAAGCCCAGATGCAGGTGGTAAGACAGGCCTGGTTGGCTCCGGAAATGAAACGTAGC
CACAGGACATATCTTTCTAGGTGGCTTCAGAGTAATAGTTCAGTGTTAACTACTCTGCGG
TCTTTAATTTAGAATTAAGTAAAGTGAACATTAAAGAAAAAATAATTATATAATACCAGT
TTTATAGAAATTAACCTTTTGTTTTTAAAGTGCAGCCATCGTAGGTAATTGTATGAAGCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-304, gnl|bosTau2|chr19 (5107848-5108156)
               


               
               314-779, gnl|bosTau2|chr19 (5108362-5108839)
               

               
               314-779, gnl|Hg17|chr17 (55331345-55331766)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-304, gnl|bosTau2|chr19 (5107848-5108156)
               


               
               314-779, gnl|bosTau2|chr19 (5108362-5108839)
               

               
               314-779, gnl|Hg17|chr17 (55331345-55331766)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tra (0.246184)
               

               
               fco (0.157208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.246184)
               

               
               fco (0.157208)

	4-304, gnl\|bosTau2\|chr19 (5107848-5108156)

	314-779, gnl\|bosTau2\|chr19 (5108362-5108839)
	314-779, gnl\|Hg17\|chr17 (55331345-55331766)