Non-Coding RNA Search

Ss1.1-rtra02_m24.5

Sequence:


               
               TATGGCTTAGCTTTGATGAGCAGAACTATTCAAGCGAAAACACTCCAGAGACACAGGAAA
ACCTGCACACTCTTTTTTTTTTTCTTTTTTTTGTCCCTTAAATAAATAAGCTTAAAAAAA
ATACGTGTTGGATGAGGGACATGCTGAGGGACATGTAAAACAAACAAGTGTTTTTCTTAT
ACTTACTCCAATTGCTGAGACTTTATGGGTATTTTCTTATGGGACCAAAAGAAAAATGCA
GTCAGATATCATCTTGGAATTGAATCCTAAAAGACTAAAAAGCATGTCTCAGTGCAGAAA
CTTAGCAAGCATGAACTGAATCAAACATTTCCTACTCATTTAAAATTAGGAAAACACAAC
AGAAGCAGAGGGTTTGTGCCAAATTCTATGAGCAGCCCTTTTTTTAAAGACAAGCTAGGG
AGGTTGCTAGATGGACACTTTGCTCTCGTGTTCATTTTTTTTTTTTTAAGGCAAATGTAA
CTTAATAGTTTTGTAAATGGGAGAGGGGGAATCTATAAACTATAAATACAGTTATTTTAT
TTTTTGTACATTTTTAAGAAGAAAAAAATAAATATTCATACCGTAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGGCTTAGCTTTGATGAGCAGAACTATTCAAGCGAAAACACTCCAGAGACACAGGAAA
ACCTGCACACTCTTTTTTTTTTTCTTTTTTTTGTCCCTTAAATAAATAAGCTTAAAAAAA
ATACGTGTTGGATGAGGGACATGCTGAGGGACATGTAAAACAAACAAGTGTTTTTCTTAT
ACTTACTCCAATTGCTGAGACTTTATGGGTATTTTCTTATGGGACCAAAAGAAAAATGCA
GTCAGATATCATCTTGGAATTGAATCCTAAAAGACTAAAAAGCATGTCTCAGTGCAGAAA
CTTAGCAAGCATGAACTGAATCAAACATTTCCTACTCATTTAAAATTAGGAAAACACAAC
AGAAGCAGAGGGTTTGTGCCAAATTCTATGAGCAGCCCTTTTTTTAAAGACAAGCTAGGG
AGGTTGCTAGATGGACACTTTGCTCTCGTGTTCATTTTTTTTTTTTTAAGGCAAATGTAA
CTTAATAGTTTTGTAAATGGGAGAGGGGGAATCTATAAACTATAAATACAGTTATTTTAT
TTTTTGTACATTTTTAAGAAGAAAAAAATAAATATTCATACCGTAAGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               37-588, gnl|bosTau2|chr14 (41246725-41246184)
               

               
               37-588, gnl|Hg17|chr8 (102750539-102751124)
               

               
               37-588, gnl|Mm7|chr15 (37473723-37474252)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               37-588, gnl|bosTau2|chr14 (41246725-41246184)
               

               
               37-588, gnl|Hg17|chr8 (102750539-102751124)
               

               
               37-588, gnl|Mm7|chr15 (37473723-37474252)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               aor (0.195274)
               

               
               ton (0.1755)
               

               
               mcp (0.170648)
               

               
               kid (0.129735)
               

               
               tra (0.123092)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               ton (0.1755)
               

               
               mcp (0.170648)
               

               
               kid (0.129735)
               

               
               tra (0.123092)

	37-588, gnl\|bosTau2\|chr14 (41246725-41246184)
	37-588, gnl\|Hg17\|chr8 (102750539-102751124)
	37-588, gnl\|Mm7\|chr15 (37473723-37474252)

	aor (0.195274)
	ton (0.1755)
	mcp (0.170648)
	kid (0.129735)
	tra (0.123092)