Non-Coding RNA Search

Ss1.1-rtra04_m16.5

Sequence:


               
               CATGATTATAATTTATATTAGTGAATTCTGACTTTTTTTAATTTAATGGTTATTGGCTTA
TTCAGATATTCAGATATTTTTTGGGATTTTGTGTGCGTGTGTGTGTGTGTGAAAACAAAT
TTTTTTGTATAGCCGTATATGTATGCGTGTGTGTGTGTATACATATAATCTCTATAATTT
TCTGTGTCATCTAATTTTTTAAATTTGTAGGAATTTAGTTCACAGAATATTTTTATGTGG
GTACAGTTCATTGTGATTTTTTTTAAACCATGATTTATGCGATGGGCTTGTTTTTATGTA
TCTCCAGGAATGAAACAGTTTTAACAGCTGTACAGTGGTACTGATGGTGGCTCTAGTGTT
ATCTTTATTTGATTGTAGTTTGGTAGTAATGCATTGTCAGACTAGAAAAGCTAAAGAAAC
AAAATATTTTTAGTTTTGCTGAAGATTGGCCTTGTTTATGGACAGCTTTCCTAACAAGTG
ATAATTAACTTTATCAGGCGTCAACATCTGTTTCAGGAACATAGCATATGTTTACATGTC
AGAACTTTTGTTTAATTCTTTGACATTTCTAAATTGGTTTAAAGAAATTTAGCAAATACA
ACTATATATTTATATTAAATGTATTAATATATTTAAGTTGCTTAGGACAGTTCTTGGCAC
ATAGTAAATAATAGATGTTATTAATGTAATTGCAAGGTTCAGACTTGCATTCGATGTATA
TTATTTGACTTATACATATGTTAACAGAGGTTATGTCAGTGATGGTCATGATAGAGAACA
AATTATTAGGAATCTATTATCAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGATTATAATTTATATTAGTGAATTCTGACTTTTTTTAATTTAATGGTTATTGGCTTA
TTCAGATATTCAGATATTTTTTGGGATTTTGTGTGCGTGTGTGTGTGTGTGAAAACAAAT
TTTTTTGTATAGCCGTATATGTATGCGTGTGTGTGTGTATACATATAATCTCTATAATTT
TCTGTGTCATCTAATTTTTTAAATTTGTAGGAATTTAGTTCACAGAATATTTTTATGTGG
GTACAGTTCATTGTGATTTTTTTTAAACCATGATTTATGCGATGGGCTTGTTTTTATGTA
TCTCCAGGAATGAAACAGTTTTAACAGCTGTACAGTGGTACTGATGGTGGCTCTAGTGTT
ATCTTTATTTGATTGTAGTTTGGTAGTAATGCATTGTCAGACTAGAAAAGCTAAAGAAAC
AAAATATTTTTAGTTTTGCTGAAGATTGGCCTTGTTTATGGACAGCTTTCCTAACAAGTG
ATAATTAACTTTATCAGGCGTCAACATCTGTTTCAGGAACATAGCATATGTTTACATGTC
AGAACTTTTGTTTAATTCTTTGACATTTCTAAATTGGTTTAAAGAAATTTAGCAAATACA
ACTATATATTTATATTAAATGTATTAATATATTTAAGTTGCTTAGGACAGTTCTTGGCAC
ATAGTAAATAATAGATGTTATTAATGTAATTGCAAGGTTCAGACTTGCATTCGATGTATA
TTATTTGACTTATACATATGTTAACAGAGGTTATGTCAGTGATGGTCATGATAGAGAACA
AATTATTAGGAATCTATTATCAAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               376-763, gnl|bosTau2|chr10 (47442222-47442599)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               376-763, gnl|bosTau2|chr10 (47442222-47442599)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               cbe (0.239234)
               

               
               fco (0.157208)
               

               
               liv (0.146284)
               

               
               tra (0.123092)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               fco (0.157208)
               

               
               liv (0.146284)
               

               
               tra (0.123092)