Ss1.1-rtra07_p8.5.5
|
GGCCTTAGTTCTCTTTCCCATCTTGCAAGATGGCGGGTGAAAAAGCTGAGAAGCCAGGAA
CTAAGGAGAAAAAGCCTGAAGCCAAGAAGGCTGATGCTGGTGGTAAAGTTAAAAAGGCTA
AGAAGGTTAAGAAGGGGAAGCCCCACTGCAGCCGAAACCCTGTCCTGGTCAGAGGAATTG
GCAGATATTCCCGATCGGCTATGTATTCCAGAAAGGCTTTGTACAAGAGGAAGTATTCAG
CAGCTAAATCCAAGGTTGAAAAGAAAAAGAAGGTGAGAGTTCTTGCTACTGTCACAAAAC
CCGTCGGTGGTGACAAGAATGGTGGTACCCGAGTTGTTAAACTTCGAAAAATGCCTAGAT
ATTATCCTACTGAAGATGTGCCCCGAAAACTGTTGAGTCATGGCAAAAAACCCTTCAGTA
AGCACGTGAGAAAACTGCGGGCCAGCATCACTCCTGGGACCATTCTGATCATCCTCACCG
GGCGCCACAGAGGCAAGAGGGTCATTTTCCTGAAGCAGCTGAGCAGTGGCTTGTTACTTG
TGACTGGACCTCTGTCTCTCAATCGAGTTCCTCTGCGTAGAACACACCAGAAATTTGTTA
TTGCCACCTCCACCAAAATTGATATCAGTGGAGTAAAAATTCCAGAACATCTCACTGATG
CTTACTTCAAGAAGAAGAAGCTGCGTAAGCCTAGACACCAGGAAGGAGAGATCTTCGACA
CAGAGAAAGAGAAATACGAAATTTCAGAGCAGCGCAAGGTTGATCAGAAAGCTGTGGACT
CACAAATTCTGCGAAGAATCAAAGCTGTTCCTCAGCTCCAGGGCTACCTCCGCTCTGTGT
TTGCCCTCACAAATGGGATTTATCCTCACAAGTTGGTGTTCTAAACCTCTTACAAAGAAC
ACAATTAAATAACTGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCCTTAGTTCTCTTTCCCATCTTGCAAGATGGCGGGTGAAAAAGCTGAGAAGCCAGGAA
CTAAGGAGAAAAAGCCTGAAGCCAAGAAGGCTGATGCTGGTGGTAAAGTTAAAAAGGCTA
AGAAGGTTAAGAAGGGGAAGCCCCACTGCAGCCGAAACCCTGTCCTGGTCAGAGGAATTG
GCAGATATTCCCGATCGGCTATGTATTCCAGAAAGGCTTTGTACAAGAGGAAGTATTCAG
CAGCTAAATCCAAGGTTGAAAAGAAAAAGAAGGTGAGAGTTCTTGCTACTGTCACAAAAC
CCGTCGGTGGTGACAAGAATGGTGGTACCCGAGTTGTTAAACTTCGAAAAATGCCTAGAT
ATTATCCTACTGAAGATGTGCCCCGAAAACTGTTGAGTCATGGCAAAAAACCCTTCAGTA
AGCACGTGAGAAAACTGCGGGCCAGCATCACTCCTGGGACCATTCTGATCATCCTCACCG
GGCGCCACAGAGGCAAGAGGGTCATTTTCCTGAAGCAGCTGAGCAGTGGCTTGTTACTTG
TGACTGGACCTCTGTCTCTCAATCGAGTTCCTCTGCGTAGAACACACCAGAAATTTGTTA
TTGCCACCTCCACCAAAATTGATATCAGTGGAGTAAAAATTCCAGAACATCTCACTGATG
CTTACTTCAAGAAGAAGAAGCTGCGTAAGCCTAGACACCAGGAAGGAGAGATCTTCGACA
CAGAGAAAGAGAAATACGAAATTTCAGAGCAGCGCAAGGTTGATCAGAAAGCTGTGGACT
CACAAATTCTGCGAAGAATCAAAGCTGTTCCTCAGCTCCAGGGCTACCTCCGCTCTGTGT
TTGCCCTCACAAATGGGATTTATCCTCACAAGTTGGTGTTCTAAACCTCTTACAAAGAAC
ACAATTAAATAACTGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
bla (10.1965) |
|
spl (6.87285) |
|
fat (5.60224) |
|
mcp (5.2901) |
|
eje (5.04052) |
|
pgl (4.73934) |
|
tbr (4.47117) |
|
eep (4.41231) |
|
tra (4.30822) |
|
ova (4.26136) |
|
ese (4.17457) |
|
nca (3.96934) |
|
lin (3.78567) |
|
med (3.60381) |
|
lnt (3.4154) |
|
ski (3.37491) |
|
liv (3.36454) |
|
nco (3.23468) |
|
ssp (3.11695) |
|
elu (3.08285) |
|
sug (3.05499) |
|
thg (3.04298) |
|
ldo (2.91008) |
|
nje (2.82064) |
|
sin (2.79916) |
|
eru (2.52101) |
|
ebs (2.48433) |
|
nep (2.39102) |
|
eye (2.38704) |
|
mas (2.31335) |
|
nlu (2.30017) |
|
hea (2.24949) |
|
gul (2.13106) |
|
ece (2.06375) |
|
pro (2.04813) |
|
sag (2.00987) |
|
hlv (1.94959) |
|
ret (1.931) |
|
nms (1.92472) |
|
lyg (1.86344) |
|
nmm (1.85923) |
|
sme (1.83262) |
|
jca (1.82336) |
|
cst (1.82047) |
|
cly (1.80963) |
|
fcc (1.78006) |
|
fty (1.7584) |
|
ste (1.75771) |
|
ecc (1.72553) |
|
lun (1.65538) |
|
pty (1.56986) |
|
cut (1.52931) |
|
sto (1.43859) |
|
pan (1.41576) |
|
mgp (1.38408) |
|
col (1.36505) |
|
che (1.36314) |
|
cag (1.36075) |
|
ute (1.32784) |
|
nbm (1.29122) |
|
csk (1.26671) |
|
tes (1.24688) |
|
ill (1.22915) |
|
cbe (1.19617) |
|
jej (1.08814) |
|
fce (1.08637) |
|
cov (1.05722) |
|
duo (1.03681) |
|
hyp (0.999857) |
|
cki (0.991408) |
|
rec (0.865351) |
|
fhi (0.847889) |
|
cga (0.837287) |
|
amn (0.835422) |
|
cje (0.826173) |
|
fli (0.811524) |
|
csp (0.805932) |
|
kid (0.778412) |
|
eli (0.759071) |
|
clu (0.717875) |
|
ton (0.702001) |
|
vin (0.665115) |
|
mga (0.64082) |
|
cte (0.58548) |
|
spc (0.566829) |
|
cli (0.458435) |
|
bfe (0.449573) |
|
cbr (0.383926) |
|
fbs (0.350693) |
|
cty (0.31224) |
|
isp (0.300752) |
|
cmu (0.186393) |
|
mgm (0.180343) |
|
fco (0.157208) |
|
cbl (0.114797) |
|
bla (10.1965) |
|
spl (6.87285) |
|
fat (5.60224) |
|
mcp (5.2901) |
|
eje (5.04052) |
|
pgl (4.73934) |
|
tbr (4.47117) |
|
eep (4.41231) |
|
tra (4.30822) |
|
ova (4.26136) |
|
ese (4.17457) |
|
nca (3.96934) |
|
lin (3.78567) |
|
med (3.60381) |
|
lnt (3.4154) |
|
ski (3.37491) |
|
liv (3.36454) |
|
nco (3.23468) |
|
ssp (3.11695) |
|
elu (3.08285) |
|
sug (3.05499) |
|
thg (3.04298) |
|
ldo (2.91008) |
|
nje (2.82064) |
|
sin (2.79916) |
|
eru (2.52101) |
|
ebs (2.48433) |
|
nep (2.39102) |
|
eye (2.38704) |
|
mas (2.31335) |
|
nlu (2.30017) |
|
hea (2.24949) |
|
gul (2.13106) |
|
ece (2.06375) |
|
pro (2.04813) |
|
sag (2.00987) |
|
hlv (1.94959) |
|
ret (1.931) |
|
nms (1.92472) |
|
lyg (1.86344) |
|
nmm (1.85923) |
|
sme (1.83262) |
|
jca (1.82336) |
|
cst (1.82047) |
|
cly (1.80963) |
|
fcc (1.78006) |
|
fty (1.7584) |
|
ste (1.75771) |
|
ecc (1.72553) |
|
lun (1.65538) |
|
pty (1.56986) |
|
cut (1.52931) |
|
sto (1.43859) |
|
pan (1.41576) |
|
mgp (1.38408) |
|
col (1.36505) |
|
che (1.36314) |
|
cag (1.36075) |
|
ute (1.32784) |
|
nbm (1.29122) |
|
csk (1.26671) |
|
tes (1.24688) |
|
ill (1.22915) |
|
cbe (1.19617) |
|
jej (1.08814) |
|
fce (1.08637) |
|
cov (1.05722) |
|
duo (1.03681) |
|
hyp (0.999857) |
|
cki (0.991408) |
|
rec (0.865351) |
|
fhi (0.847889) |
|
cga (0.837287) |
|
amn (0.835422) |
|
cje (0.826173) |
|
fli (0.811524) |
|
csp (0.805932) |
|
kid (0.778412) |
|
eli (0.759071) |
|
clu (0.717875) |
|
ton (0.702001) |
|
vin (0.665115) |
|
mga (0.64082) |
|
cte (0.58548) |
|
spc (0.566829) |
|
cli (0.458435) |
|
bfe (0.449573) |
|
cbr (0.383926) |
|
fbs (0.350693) |
|
cty (0.31224) |
|
isp (0.300752) |
|
cmu (0.186393) |
|
mgm (0.180343) |
|
fco (0.157208) |
|
cbl (0.114797) |
