Non-Coding RNA Search

Ss1.1-rtra08_p18.5

Sequence:


               
               AGGCAGATTCACAATTCGACGGTGGTGTTTGCATTTGTGGGCGGATGGATATGGTTCTTA
GTTTGCTGTTTGGGAACAGACTGTAGCCTTCTCTTCAAAAATATGCCCCAGCACTTAATC
GGTGATAATCAAGCCACACACAGCACCCACTGGTGCTGAGAGTGAGCAGAAACTGAAACC
AAAATCAAATGTGCCCTTTGGGGAGAAAAGAGGTAACTTCACGCCAACCTGACGGGGTGA
GGGAGGGTCAGGAATGGACTGATCCAATCGGCCTTTGTCCCCTCAAACTGCGTGTGTGTG
TGTGTGTGTGTGTGTGTGTACACACAACCATAATCTGGAACTTTAGGAAATAAGACCATT
TTCTTACTGCAAAAAGAACTAGATGTCATTCCTAACAGGTTTCTTTCTAAATTGCACTAA
TTAATATTGGACTATTACGAGTCCATCAATTTCTGATGTCTCGATGTTTTTTGCAATCCT
TGTGAAAAGCATTCTTGATTTAAATGTTACTAACACATATTCTTTAATAAGTTCCTTAAC
ACTGGCTTTTTTTTTAAGTTGTACAAATAGGTTTTTCTCTTGTGGCTTTAGCACTTTAAG
AAGTTTGGTGTTTGCATCGCTTTCGGTGTGTCCAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGCAGATTCACAATTCGACGGTGGTGTTTGCATTTGTGGGCGGATGGATATGGTTCTTA
GTTTGCTGTTTGGGAACAGACTGTAGCCTTCTCTTCAAAAATATGCCCCAGCACTTAATC
GGTGATAATCAAGCCACACACAGCACCCACTGGTGCTGAGAGTGAGCAGAAACTGAAACC
AAAATCAAATGTGCCCTTTGGGGAGAAAAGAGGTAACTTCACGCCAACCTGACGGGGTGA
GGGAGGGTCAGGAATGGACTGATCCAATCGGCCTTTGTCCCCTCAAACTGCGTGTGTGTG
TGTGTGTGTGTGTGTGTGTACACACAACCATAATCTGGAACTTTAGGAAATAAGACCATT
TTCTTACTGCAAAAAGAACTAGATGTCATTCCTAACAGGTTTCTTTCTAAATTGCACTAA
TTAATATTGGACTATTACGAGTCCATCAATTTCTGATGTCTCGATGTTTTTTGCAATCCT
TGTGAAAAGCATTCTTGATTTAAATGTTACTAACACATATTCTTTAATAAGTTCCTTAAC
ACTGGCTTTTTTTTTAAGTTGTACAAATAGGTTTTTCTCTTGTGGCTTTAGCACTTTAAG
AAGTTTGGTGTTTGCATCGCTTTCGGTGTGTCCAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-630, gnl|bosTau2|chr1 (92391345-92390721)
               

               
               23-630, gnl|Hg17|chr21 (42281205-42280563)
               

               
               23-630, gnl|Mm7|chr16 (98330323-98329470)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-630, gnl|bosTau2|chr1 (92391345-92390721)
               

               
               23-630, gnl|Hg17|chr21 (42281205-42280563)
               

               
               23-630, gnl|Mm7|chr16 (98330323-98329470)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               kid (0.129735)
               

               
               tra (0.123092)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)
               

               
               tra (0.123092)
               

               
               cty (0.10408)

	23-630, gnl\|bosTau2\|chr1 (92391345-92390721)
	23-630, gnl\|Hg17\|chr21 (42281205-42280563)
	23-630, gnl\|Mm7\|chr16 (98330323-98329470)