Non-Coding RNA Search

Ss1.1-rtra09_a13.5

Sequence:


               
               TTACTCTTAAGTACCCAGAAATACATCAGAATATTTCAAATTATTAAAAATTCTTCCTCC
AAGTGCTAGTAAGACATTGCTTTGCCCCCAAGAAACCACCATTTTCATTTTAAGGATGGG
ATATCTGAGACTTACGCATAATGGCCTCAGTCATGAAGCTAAATGTATACATTTAAAAGG
TTACCAGACTAGCTCTTTAGTATCAGAAATACACAAAGATGCAGGGAGTTTGCCTAAAAA
ATGAGAAATAGGCAAAGAACTTTTACTTGCATATTCCACGAAGGTTGATTACAAACAACA
GTGAATCTCAGTGTCTCTTAATAAACACTCCAGGGCACTTGAGATATAAAAAGGTAATTG
TTTTACTTTAGAAAATATCTCTGAAAGTTCACAATTTTGAAAAACTACTGCAGGATGTTA
CCTAAAATACAAATCCTGCAGAATTTGAGTAGGAGAAAAAAGCCTCACCAATATTATGAA
AATACTTTTTATGAAATGATTTCAAGGATTGTGAGCTAGGCAGATGAAATACAACAGGCA
TGGAAAATACTTTTTGCAAAGGAAATCTATTGATGCAAGTTAAATATATTTACAAGTCCA
AAGAGTGGGTAGAAAAATCCTAGCAGTATAACAAATGTGCATTCTACTACTTGGATTACT
GAATATTATTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTACTCTTAAGTACCCAGAAATACATCAGAATATTTCAAATTATTAAAAATTCTTCCTCC
AAGTGCTAGTAAGACATTGCTTTGCCCCCAAGAAACCACCATTTTCATTTTAAGGATGGG
ATATCTGAGACTTACGCATAATGGCCTCAGTCATGAAGCTAAATGTATACATTTAAAAGG
TTACCAGACTAGCTCTTTAGTATCAGAAATACACAAAGATGCAGGGAGTTTGCCTAAAAA
ATGAGAAATAGGCAAAGAACTTTTACTTGCATATTCCACGAAGGTTGATTACAAACAACA
GTGAATCTCAGTGTCTCTTAATAAACACTCCAGGGCACTTGAGATATAAAAAGGTAATTG
TTTTACTTTAGAAAATATCTCTGAAAGTTCACAATTTTGAAAAACTACTGCAGGATGTTA
CCTAAAATACAAATCCTGCAGAATTTGAGTAGGAGAAAAAAGCCTCACCAATATTATGAA
AATACTTTTTATGAAATGATTTCAAGGATTGTGAGCTAGGCAGATGAAATACAACAGGCA
TGGAAAATACTTTTTGCAAAGGAAATCTATTGATGCAAGTTAAATATATTTACAAGTCCA
AAGAGTGGGTAGAAAAATCCTAGCAGTATAACAAATGTGCATTCTACTACTTGGATTACT
GAATATTATTAT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               35-663, gnl|bosTau2|chr19 (42946796-42947431)
               

               
               35-663, gnl|Hg17|chr17 (63412561-63411626)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               35-663, gnl|bosTau2|chr19 (42946796-42947431)
               

               
               35-663, gnl|Hg17|chr17 (63412561-63411626)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.292569)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.292569)
               

               
               tra (0.123092)

	35-663, gnl\|bosTau2\|chr19 (42946796-42947431)
	35-663, gnl\|Hg17\|chr17 (63412561-63411626)