Ss1.1-rtra13_o20.5
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CTCTGCTAGTTTACTACTAATTGGGGGGAATTTTTGGATAATTTTTAAATTCAAAGTTAT
TTATAAAAGGCTAGAATTTGTTTTAATTTTTTGTACTTTGAGCCACTTCACATGAAGACT
CAGTTGCAATTTTTATCAACTACATTTTTATTAACAGTCAAATACAGTGGTGGTTTTCTC
AGAGTTTGGATGAGAGTGTTGTTACCATGTTTCTTCTTTGTGGTACAATATTCTTTTCAG
TGCAAAAGAGATGTCTTTTAGTTAAATAGGGGAAAAAAAAAAGAAAAAACCACACCAAAC
CTCTTGATGTATAAGTACATGGAAAATATTAGCTATGTGAGTGCTTTAGTGCTAAGCATC
TCACAGCACCAGTGAAATCTATAATTGAGAAATGGTCGGGTGGTCAAGAGCCAACTATGC
AGCAGTGTACTGTCTAGTTATTTTGTAGGTCTGTGTGTGGAACCAGTTTAACCCTATTCT
AAGTTGTATATGAAGGTGACCCTTTGGGGGATAGTTCATATCAGCTAATTTGGATACTTT
TAGCAAATAGGAACTTATTTCTTAGCTATGAACATGCATTACTTCTTTGGAATTTTTTTC
CTTATTTTTGTTGTTCCCAGGAATTTATTTGAAATATTAATAGGCATAAAATAGCATCAT
TATTGTACTTAAGCTATGGATATTTTATTTTATATTTTCTTTATTTATAACTGTGCCAAG
TATTATTTTGCTACTTACCATGTTACTCTGTGGAAGGAAAAACCTGTAAAGTGTTTAATA
AATTAGCTCTCCTTACATAAATTAAATCTGTCAAAATTTTGTAAAATATTAATCAGAATA
AATATTGACTCT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CTCTGCTAGTTTACTACTAATTGGGGGGAATTTTTGGATAATTTTTAAATTCAAAGTTAT
TTATAAAAGGCTAGAATTTGTTTTAATTTTTTGTACTTTGAGCCACTTCACATGAAGACT
CAGTTGCAATTTTTATCAACTACATTTTTATTAACAGTCAAATACAGTGGTGGTTTTCTC
AGAGTTTGGATGAGAGTGTTGTTACCATGTTTCTTCTTTGTGGTACAATATTCTTTTCAG
TGCAAAAGAGATGTCTTTTAGTTAAATAGGGGAAAAAAAAAAGAAAAAACCACACCAAAC
CTCTTGATGTATAAGTACATGGAAAATATTAGCTATGTGAGTGCTTTAGTGCTAAGCATC
TCACAGCACCAGTGAAATCTATAATTGAGAAATGGTCGGGTGGTCAAGAGCCAACTATGC
AGCAGTGTACTGTCTAGTTATTTTGTAGGTCTGTGTGTGGAACCAGTTTAACCCTATTCT
AAGTTGTATATGAAGGTGACCCTTTGGGGGATAGTTCATATCAGCTAATTTGGATACTTT
TAGCAAATAGGAACTTATTTCTTAGCTATGAACATGCATTACTTCTTTGGAATTTTTTTC
CTTATTTTTGTTGTTCCCAGGAATTTATTTGAAATATTAATAGGCATAAAATAGCATCAT
TATTGTACTTAAGCTATGGATATTTTATTTTATATTTTCTTTATTTATAACTGTGCCAAG
TATTATTTTGCTACTTACCATGTTACTCTGTGGAAGGAAAAACCTGTAAAGTGTTTAATA
AATTAGCTCTCCTTACATAAATTAAATCTGTCAAAATTTTGTAAAATATTAATCAGAATA
AATATTGACTCT
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1-278, gnl|bosTau2|chr5 (4325399-4325121) |
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1-278, gnl|canFam2|chr15 (22732748-22733383) |
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1-278, gnl|dasNov1|scaffold_24902 (3512-2879) |
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1-278, gnl|galGal2|chr1 (35085350-35086137) |
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1-278, gnl|hg17|chr12 (75748951-75749581) |
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1-278, gnl|Hg17|chr12 (75749114-75749383) |
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1-278, gnl|loxAfr1|scaffold_9001 (81578-80945) |
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1-278, gnl|mm7|chr10 (110402922-110402314) |
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1-278, gnl|Mm7|chr10 (110402758-110402496) |
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1-278, gnl|monDom2|scaffold_36 (9465025-9465693) |
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1-278, gnl|oryCun1|scaffold_126708 (10056-10688) |
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1-278, gnl|panTro1|chr10 (77292564-77293194) |
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1-278, gnl|rheMac2|chr11 (73850689-73851331) |
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1-278, gnl|rn3|chr7 (49952964-49952363) |
| |
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297-852, gnl|bosTau2|chr5 (4325123-4324570) |
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297-852, gnl|Hg17|chr12 (75749381-75749941) |
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297-852, gnl|Mm7|chr10 (110402498-110401983) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-278, gnl|bosTau2|chr5 (4325399-4325121) |
|
1-278, gnl|canFam2|chr15 (22732748-22733383) |
|
1-278, gnl|dasNov1|scaffold_24902 (3512-2879) |
|
1-278, gnl|galGal2|chr1 (35085350-35086137) |
|
1-278, gnl|hg17|chr12 (75748951-75749581) |
|
1-278, gnl|Hg17|chr12 (75749114-75749383) |
|
1-278, gnl|loxAfr1|scaffold_9001 (81578-80945) |
|
1-278, gnl|mm7|chr10 (110402922-110402314) |
|
1-278, gnl|Mm7|chr10 (110402758-110402496) |
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1-278, gnl|monDom2|scaffold_36 (9465025-9465693) |
|
1-278, gnl|oryCun1|scaffold_126708 (10056-10688) |
|
1-278, gnl|panTro1|chr10 (77292564-77293194) |
|
1-278, gnl|rheMac2|chr11 (73850689-73851331) |
|
1-278, gnl|rn3|chr7 (49952964-49952363) |
| |
|
297-852, gnl|bosTau2|chr5 (4325123-4324570) |
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297-852, gnl|Hg17|chr12 (75749381-75749941) |
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297-852, gnl|Mm7|chr10 (110402498-110401983) |
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vin (0.332557) |
|
fco (0.314416) |
|
spc (0.226732) |
|
hea (0.204499) |
|
aor (0.195274) |
|
fty (0.17584) |
|
duo (0.172801) |
|
lun (0.150489) |
|
ski (0.146735) |
|
lin (0.145603) |
|
spl (0.143184) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
thg (0.126791) |
|
bla (0.124347) |
|
tra (0.123092) |
|
ebs (0.118301) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
vin (0.332557) |
|
fco (0.314416) |
|
spc (0.226732) |
|
hea (0.204499) |
|
aor (0.195274) |
|
fty (0.17584) |
|
duo (0.172801) |
|
lun (0.150489) |
|
ski (0.146735) |
|
lin (0.145603) |
|
spl (0.143184) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
thg (0.126791) |
|
bla (0.124347) |
|
tra (0.123092) |
|
ebs (0.118301) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
