Non-Coding RNA Search

Ss1.1-rtra14_c6.5

Sequence:


               
               CCACAATGAGAACTCCCTAAATCAGTACTTTTATCACATGCCTTTATGTAAACTTAAGAA
AGAGCAATGGGGTATCTCCATTTCTTTGAGATCAGTGTTTGTAATTTAAATATATAAATA
GATGGTAAAAATATTATTAGAAATACCATATTAGAATCCAGACATTTCCCATCCCTCTCC
ATAATACAACTCCTTTCATGGATTATGTATTTTTTCCCTTTATGGCTGATCTCATACTAA
GCCCCTTGCCATAGCTAGGTATTTATTAAATGCAGATGTTATTAAAAGAAAAAATAAAGT
TCAGATTCTCAACAGTAAACCCTGTGTGTTGCATCTGTAGTTCAGAAATTACAAATGATT
CAAATGTAAACAAATCACTCTACAGAAGTATACAAATTAACAAATAAAAACATTCACTAT
ACAGAAGTTAAATTCTAACTAGACCAGGAATCGTTTGTTCTTCATGTCAGAAACTGCAAA
TAATAGAGTGAACAAAGCTCTTTATGGAAGACTGAACAACTGTAAATAGATTATATCTAA
AATTTACTTGGTCTANGTATCAGTTAAATAAAAAAATCAGTCCATGTGGGCAAGACCCGA
TAGAAACAAGTGGTTTCACGGTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACAATGAGAACTCCCTAAATCAGTACTTTTATCACATGCCTTTATGTAAACTTAAGAA
AGAGCAATGGGGTATCTCCATTTCTTTGAGATCAGTGTTTGTAATTTAAATATATAAATA
GATGGTAAAAATATTATTAGAAATACCATATTAGAATCCAGACATTTCCCATCCCTCTCC
ATAATACAACTCCTTTCATGGATTATGTATTTTTTCCCTTTATGGCTGATCTCATACTAA
GCCCCTTGCCATAGCTAGGTATTTATTAAATGCAGATGTTATTAAAAGAAAAAATAAAGT
TCAGATTCTCAACAGTAAACCCTGTGTGTTGCATCTGTAGTTCAGAAATTACAAATGATT
CAAATGTAAACAAATCACTCTACAGAAGTATACAAATTAACAAATAAAAACATTCACTAT
ACAGAAGTTAAATTCTAACTAGACCAGGAATCGTTTGTTCTTCATGTCAGAAACTGCAAA
TAATAGAGTGAACAAAGCTCTTTATGGAAGACTGAACAACTGTAAATAGATTATATCTAA
AATTTACTTGGTCTANGTATCAGTTAAATAAAAAAATCAGTCCATGTGGGCAAGACCCGA
TAGAAACAAGTGGTTTCACGGTTG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               18-572, gnl|bosTau2|chr1 (45897158-45896597)
               

               
               18-572, gnl|Hg17|chr3 (194896813-194897341)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-572, gnl|bosTau2|chr1 (45897158-45896597)
               

               
               18-572, gnl|Hg17|chr3 (194896813-194897341)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cst (0.140036)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)
               

               
               tra (0.123092)

	18-572, gnl\|bosTau2\|chr1 (45897158-45896597)
	18-572, gnl\|Hg17\|chr3 (194896813-194897341)