Non-Coding RNA Search

Ss1.1-rtra15_b8.5.5

Sequence:


               
               AAATCTTATTATGTGATTCCTATGTTTTAAATTTTC------------------------
------------------------------------------------------------
------------------------CTGTGGTGTAGGTCAAAGACGTGGCTCGGATCCCGA
GTTGCCATGGCTCTGGTGTTTGCCGGGGGCTACAGCTCCAATTAGACCCCTAGCCTGGGA
ACCTCCATATGCCACAGGTGCAACCCTAGAAAAGACAAAAAAAATAGAAACAATAAATTT
TCTGAATCCTCAATACTGCCACGTATAAATTCCTTGATATAATATATTAGGCTTTCAAAA
ATCTGATCTCCAACTTAACCTTAAGTATCCATGTTTACTAATATTTTACTCTTCCCGAAC
ACCTTACACTCTGCCAGAAAGTAATGCTGATCATTGCTGAAACACTCTTGTGTGCCTATG
AGCTAGATGCTTTGCTAGGCTTTGAAGAAAGAAAAATGAGATGCTATCCTTTACCCCGTG
TGATGTTTCTATAAAGGAGACTGGGAAGTTGACAGGCAGTTATTACACAGTATTGTTAGT
ACTAGAATCAGGGCCCCTAATTTCTTGTGTACCTGTCTGCTTCTCCCATTGGATTGGAAA
CTCATTAAGGGCAAGGACTGTGACTTATTTAACTTCCTGTTCTGAATAGCACTTAATATG
TATTTATGAATGAATAAATCTACTTGAAATTAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATCTTATTATGTGATTCCTATGTTTTAAATTTTC------------------------
------------------------------------------------------------
------------------------CTGTGGTGTAGGTCAAAGACGTGGCTCGGATCCCGA
GTTGCCATGGCTCTGGTGTTTGCCGGGGGCTACAGCTCCAATTAGACCCCTAGCCTGGGA
ACCTCCATATGCCACAGGTGCAACCCTAGAAAAGACAAAAAAAATAGAAACAATAAATTT
TCTGAATCCTCAATACTGCCACGTATAAATTCCTTGATATAATATATTAGGCTTTCAAAA
ATCTGATCTCCAACTTAACCTTAAGTATCCATGTTTACTAATATTTTACTCTTCCCGAAC
ACCTTACACTCTGCCAGAAAGTAATGCTGATCATTGCTGAAACACTCTTGTGTGCCTATG
AGCTAGATGCTTTGCTAGGCTTTGAAGAAAGAAAAATGAGATGCTATCCTTTACCCCGTG
TGATGTTTCTATAAAGGAGACTGGGAAGTTGACAGGCAGTTATTACACAGTATTGTTAGT
ACTAGAATCAGGGCCCCTAATTTCTTGTGTACCTGTCTGCTTCTCCCATTGGATTGGAAA
CTCATTAAGGGCAAGGACTGTGACTTATTTAACTTCCTGTTCTGAATAGCACTTAATATG
TATTTATGAATGAATAAATCTACTTGAAATTAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               336-645, gnl|bosTau2|chr28 (2146290-2145983)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               336-645, gnl|bosTau2|chr28 (2146290-2145983)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cje (0.165235)
               

               
               cki (0.165235)
               

               
               ute (0.132784)
               

               
               tra (0.123092)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)
               

               
               cki (0.165235)
               

               
               ute (0.132784)
               

               
               tra (0.123092)