Non-Coding RNA Search

Ss1.1-rtra15_f18.5

Sequence:


               
               AAAAAGCTCTGGCAGAATATTTGCAAAGTTGATTAATGAAACTGAGAAATTTTGTTCTGT
TTTCTTGAGTAAATCATTTCTGTAAGGCAGCTAGAAAATAGTATTTTTTTCGATAAAACT
GTTTGTATTCCTGTATTAACATAATGAATTGCTCAGCTACAGAGTTACTATAAAATAAAC
ATGACTACTCCAAAAGAGATTTTTTTTTTCCTCCAGTCTTAAGGAATAGTTTGGAATTAA
ATATGCATTTTTCCCACTTGAATCACGTATGCTGAAACCCATTTCCTCTGTAACAACACA
TGATGAGGGAAAGGGACATGCTATATTCTAAATGTAAATTGATCAAGGGCAGCTCCTTTG
TACTAGGTTTGAAAACTCAATGTTTTCCATTTAAAAAAAATCCTCAAGTATTTTAATCTT
GTAAACATCCTAAAATTTCTTTTAGAAAAAAAGAGCTTACTGTTTCTGCATTCATCTTTG
TAACGTTTCTCTATCCTAACACAACAGATGTGGAATCTGCCGTTTCCACACTTAAAACAT
GTGCCAAAGATTATTGCTTTCCGGTTAGTACTAATTACTTCATGGACACAGGATAAAGAA
ACATATAAAGCACTGTCACTGTTGTTACCCTCTCCTTTGTAATACCTCTATTTTAAACCC
AATAAAGGAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAGCTCTGGCAGAATATTTGCAAAGTTGATTAATGAAACTGAGAAATTTTGTTCTGT
TTTCTTGAGTAAATCATTTCTGTAAGGCAGCTAGAAAATAGTATTTTTTTCGATAAAACT
GTTTGTATTCCTGTATTAACATAATGAATTGCTCAGCTACAGAGTTACTATAAAATAAAC
ATGACTACTCCAAAAGAGATTTTTTTTTTCCTCCAGTCTTAAGGAATAGTTTGGAATTAA
ATATGCATTTTTCCCACTTGAATCACGTATGCTGAAACCCATTTCCTCTGTAACAACACA
TGATGAGGGAAAGGGACATGCTATATTCTAAATGTAAATTGATCAAGGGCAGCTCCTTTG
TACTAGGTTTGAAAACTCAATGTTTTCCATTTAAAAAAAATCCTCAAGTATTTTAATCTT
GTAAACATCCTAAAATTTCTTTTAGAAAAAAAGAGCTTACTGTTTCTGCATTCATCTTTG
TAACGTTTCTCTATCCTAACACAACAGATGTGGAATCTGCCGTTTCCACACTTAAAACAT
GTGCCAAAGATTATTGCTTTCCGGTTAGTACTAATTACTTCATGGACACAGGATAAAGAA
ACATATAAAGCACTGTCACTGTTGTTACCCTCTCCTTTGTAATACCTCTATTTTAAACCC
AATAAAGGAATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-672, gnl|bosTau2|chr29 (99210-98556)
               

               
               3-672, gnl|Hg17|chr11 (92810583-92811274)
               

               
               3-672, gnl|Mm7|chr9 (15399926-15399329)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-672, gnl|bosTau2|chr29 (99210-98556)
               

               
               3-672, gnl|Hg17|chr11 (92810583-92811274)
               

               
               3-672, gnl|Mm7|chr9 (15399926-15399329)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tra (0.369276)
               

               
               fco (0.157208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.369276)
               

               
               fco (0.157208)

	3-672, gnl\|bosTau2\|chr29 (99210-98556)
	3-672, gnl\|Hg17\|chr11 (92810583-92811274)
	3-672, gnl\|Mm7\|chr9 (15399926-15399329)