Non-Coding RNA Search

Ss1.1-rtra15_p24.5

Sequence:


               
               CCTATTTAACTTTTGTATAGTGTTCCACAATCTGTTTAGCCTATAATGGACACTAGGGTA
ATTTTTTTTCCCCCTATTTACAAACGGTGCTGAAAAGAATGTCATCCTCTGCCTCTTTAT
GTGCATATAAGGATTTCTCTACTATATGCTTAAGCTTTGAATTGCTGGATCAGAGTTAGA
CAGTTTTAAAGAGACACTTTATTGGGCTATCAGAATGGCTATTATTAGTTTACAGTTTCT
CAGCAGTGAGTGAATACCTGCTCCCCATATCATTAAAGACATTTGGTTTTAGATTAACAA
TTTTTAAATTAACCTAATATGTGAAAAATTGTCATTTTTATTGTTTATATTAAAAATATC
TGACTCTAGTGAGGATGGTCATCTTTTCATATATTTATTTTGGACTATTATTTCTTTGCC
AACCCTGCTCATTTTTTTGTTGAATGATTTGTCTTTTTATCTTAAGGACTTGTGAGGAGA
TTTTCATACAGTTTAGATAAATATTAGTCTTATACATCTGTTATGATGTTTTCTCCCAGT
TGGTCAATTGTTTTTACTTTTGGTGTCTCTTTTAGACAGTTGTTTTATATTATACCTAAT
CAAATTGATAAATATTTTTCGACTTTTTTTTCAAAATATAAAGCATATTCTGTATTTTCT
TCTAATTATCATATATGCATCCAGATCTCCATCTGGAATTATTTTTGTGAAGAGTACAAG
GTGCAATGCTACTTTTATTCAGAAGTCCAAAAACCATTTGTTGAAGTATATTCTTACTCA
TTTTGGATGCAGTTTTATTATGTGCCAAATTCTTTAAGGTATTTGATATTCCTAATAAAT
AATGCATGGCTTAGATTATAGTCTTCCAGTATGTTTTCAGGGATGGTGGTGATAAAGCAT
TCCTAATATTTTTTTCAAAAATGTCTTGGCTATTGGTGAGTATATCTTTTTGTTTTGATT
TTAGTTGCACTAAATTTATGGTGTTAGTTTGAAGAGAATTACAGTTTACCCTTAAACAGA
GCGTTAAGGGTGCCAACCTTCTGTACAGTTGAAATCTGTCTATAATTTATACTTGGCTCT
TCATACCTGTGGTTCCTCCATATCTGTGGTTCTGCATCTGTGAATTCAACTGAAAATTGA
ATAGTACAACTGTGTAGTACTATGGTATATACTGTTGAAAAATATCCCTGTGTAAGTGGA
CTCACCCATTTCAAATCTGTGTTGTTGAAGGGTCCACCACACAATAGTTATTTTTCTTCA
AGAACAATCTATGTCTTCATTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTATTTAACTTTTGTATAGTGTTCCACAATCTGTTTAGCCTATAATGGACACTAGGGTA
ATTTTTTTTCCCCCTATTTACAAACGGTGCTGAAAAGAATGTCATCCTCTGCCTCTTTAT
GTGCATATAAGGATTTCTCTACTATATGCTTAAGCTTTGAATTGCTGGATCAGAGTTAGA
CAGTTTTAAAGAGACACTTTATTGGGCTATCAGAATGGCTATTATTAGTTTACAGTTTCT
CAGCAGTGAGTGAATACCTGCTCCCCATATCATTAAAGACATTTGGTTTTAGATTAACAA
TTTTTAAATTAACCTAATATGTGAAAAATTGTCATTTTTATTGTTTATATTAAAAATATC
TGACTCTAGTGAGGATGGTCATCTTTTCATATATTTATTTTGGACTATTATTTCTTTGCC
AACCCTGCTCATTTTTTTGTTGAATGATTTGTCTTTTTATCTTAAGGACTTGTGAGGAGA
TTTTCATACAGTTTAGATAAATATTAGTCTTATACATCTGTTATGATGTTTTCTCCCAGT
TGGTCAATTGTTTTTACTTTTGGTGTCTCTTTTAGACAGTTGTTTTATATTATACCTAAT
CAAATTGATAAATATTTTTCGACTTTTTTTTCAAAATATAAAGCATATTCTGTATTTTCT
TCTAATTATCATATATGCATCCAGATCTCCATCTGGAATTATTTTTGTGAAGAGTACAAG
GTGCAATGCTACTTTTATTCAGAAGTCCAAAAACCATTTGTTGAAGTATATTCTTACTCA
TTTTGGATGCAGTTTTATTATGTGCCAAATTCTTTAAGGTATTTGATATTCCTAATAAAT
AATGCATGGCTTAGATTATAGTCTTCCAGTATGTTTTCAGGGATGGTGGTGATAAAGCAT
TCCTAATATTTTTTTCAAAAATGTCTTGGCTATTGGTGAGTATATCTTTTTGTTTTGATT
TTAGTTGCACTAAATTTATGGTGTTAGTTTGAAGAGAATTACAGTTTACCCTTAAACAGA
GCGTTAAGGGTGCCAACCTTCTGTACAGTTGAAATCTGTCTATAATTTATACTTGGCTCT
TCATACCTGTGGTTCCTCCATATCTGTGGTTCTGCATCTGTGAATTCAACTGAAAATTGA
ATAGTACAACTGTGTAGTACTATGGTATATACTGTTGAAAAATATCCCTGTGTAAGTGGA
CTCACCCATTTCAAATCTGTGTTGTTGAAGGGTCCACCACACAATAGTTATTTTTCTTCA
AGAACAATCTATGTCTTCATTAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               6-817, gnl|bosTau2|chr10 (22557067-22556241)
               


               
               1000-1231, gnl|bosTau2|chr24 (41580656-41580886)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-817, gnl|bosTau2|chr10 (22557067-22556241)
               


               
               1000-1231, gnl|bosTau2|chr24 (41580656-41580886)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               vin (0.332557)
               

               
               tra (0.246184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               tra (0.246184)

	6-817, gnl\|bosTau2\|chr10 (22557067-22556241)

	1000-1231, gnl\|bosTau2\|chr24 (41580656-41580886)