Ss1.1-rtra17_a8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGTAGTTTAGATTTTGGGCAAAGCCAGCGTTTCCTACATGATCCAGAAATGTTGGATTC CTCATCTAAAGCACTTTCTTTTGCTAGGATTCGAAGATCATCCTTCAGTTCTAAAGATGA TAAAAGAGAAGACAGAACACCCTATCAATTAGTCAAGAAACTTCAGAAAAAAATCAGACA ATTTGAGGAACAGTTTGAAAGGGAAAGAAATAGCAAGCCCTCCTACAGTGATATTGCAGC CAATCCAAAGGTATTAAAATGGATGACAGAGCTTACCAAGCTGCGGAAGCAAATTAAAGA TGCAAAACACAAAAGCTCTGATGGAGAATTTGTACCTCAGACACGTCCACGTAGTAATAC TCTTCCAAAAAGCTTTGGCTCTTCTCTAGACCATGAAGATGAAGAGAATGAAGATGAAGC CAGGGTTATTCAGAAGGAGAAGAAGCCTTCTAAGGAAGCAACACTTGAACTTATTTTGAA AAGACTGAAGGAAAAACGTGTCGAGAGGTGTCTTCCAGAAGATATCAAAGTAATCTTGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGTAGTTTAGATTTTGGGCAAAGCCAGCGTTTCCTACATGATCCAGAAATGTTGGATTC CTCATCTAAAGCACTTTCTTTTGCTAGGATTCGAAGATCATCCTTCAGTTCTAAAGATGA TAAAAGAGAAGACAGAACACCCTATCAATTAGTCAAGAAACTTCAGAAAAAAATCAGACA ATTTGAGGAACAGTTTGAAAGGGAAAGAAATAGCAAGCCCTCCTACAGTGATATTGCAGC CAATCCAAAGGTATTAAAATGGATGACAGAGCTTACCAAGCTGCGGAAGCAAATTAAAGA TGCAAAACACAAAAGCTCTGATGGAGAATTTGTACCTCAGACACGTCCACGTAGTAATAC TCTTCCAAAAAGCTTTGGCTCTTCTCTAGACCATGAAGATGAAGAGAATGAAGATGAAGC CAGGGTTATTCAGAAGGAGAAGAAGCCTTCTAAGGAAGCAACACTTGAACTTATTTTGAA AAGACTGAAGGAAAAACGTGTCGAGAGGTGTCTTCCAGAAGATATCAAAGTAATCTTGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 86-217, gnl|bosTau2|chr7 (34527347-34527216) | |
| 86-217, gnl|canFam2|chr11 (28656054-28656236) | |
| 86-217, gnl|danRer3|chr14 (23908684-23908859) | |
| 86-217, gnl|echTel1|scaffold_214008 (2921-3093) | |
| 86-217, gnl|fr1|chrUn (33022624-33022772) | |
| 86-217, gnl|galGal2|chr13 (13167729-13167560) | |
| 86-217, gnl|hg17|chr5 (137316921-137317096) | |
| 86-217, gnl|Hg17|chr5 (137317055-137316924) | |
| 86-217, gnl|loxAfr1|scaffold_2383 (93508-93691) | |
| 86-217, gnl|mm7|chr18 (34830116-34830295) | |
| 86-217, gnl|Mm7|chr18 (34830250-34830119) | |
| 86-217, gnl|monDom2|scaffold_6 (71632242-71632071) | |
| 86-217, gnl|oryCun1|scaffold_170431 (39072-39251) | |
| 86-217, gnl|panTro1|chr4 (143920572-143920747) | |
| 86-217, gnl|rheMac2|chr6 (134357622-134357795) | |
| 86-217, gnl|rn3|chr18 (26951304-26951480) | |
| 86-217, gnl|tetNig1|chr18 (6555237-6555374) | |
| 86-217, gnl|xenTro1|scaffold_15 (50216-50382) | |
| 298-540, gnl|bosTau2|chr7 (34523980-34523738) | |
| 298-540, gnl|Hg17|chr5 (137312774-137312532) | |
| 298-540, gnl|Mm7|chr18 (34826904-34826662) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 86-217, gnl|bosTau2|chr7 (34527347-34527216) | |
| 86-217, gnl|canFam2|chr11 (28656054-28656236) | |
| 86-217, gnl|danRer3|chr14 (23908684-23908859) | |
| 86-217, gnl|echTel1|scaffold_214008 (2921-3093) | |
| 86-217, gnl|fr1|chrUn (33022624-33022772) | |
| 86-217, gnl|galGal2|chr13 (13167729-13167560) | |
| 86-217, gnl|hg17|chr5 (137316921-137317096) | |
| 86-217, gnl|Hg17|chr5 (137317055-137316924) | |
| 86-217, gnl|loxAfr1|scaffold_2383 (93508-93691) | |
| 86-217, gnl|mm7|chr18 (34830116-34830295) | |
| 86-217, gnl|Mm7|chr18 (34830250-34830119) | |
| 86-217, gnl|monDom2|scaffold_6 (71632242-71632071) | |
| 86-217, gnl|oryCun1|scaffold_170431 (39072-39251) | |
| 86-217, gnl|panTro1|chr4 (143920572-143920747) | |
| 86-217, gnl|rheMac2|chr6 (134357622-134357795) | |
| 86-217, gnl|rn3|chr18 (26951304-26951480) | |
| 86-217, gnl|tetNig1|chr18 (6555237-6555374) | |
| 86-217, gnl|xenTro1|scaffold_15 (50216-50382) | |
| 298-540, gnl|bosTau2|chr7 (34523980-34523738) | |
| 298-540, gnl|Hg17|chr5 (137312774-137312532) | |
| 298-540, gnl|Mm7|chr18 (34826904-34826662) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ski (0.29347) | |
| fat (0.147427) | |
| ret (0.128733) | |
| tra (0.123092) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ski (0.29347) | |
| fat (0.147427) | |
| ret (0.128733) | |
| tra (0.123092) |