Non-Coding RNA Search

Ss1.1-rtra17_d9.5

Sequence:


               
               ATCAAAACAGTTCCCAAACTAGATTTGCCTGTACTTTCTCACATTGAAAAAAGTTTTGAT
CCCAAGTTCAAGTCTTGTTTTCAATTCAGTATTTTCTTGTTTTAAATATTTTAAATTCAA
ATTTTGTTGAAAATATTTTCACGTTTACTTAGAAATTTGAAATTGTAGATGGGCTGATTC
GGTTTGCCTCATTTTAATTGCCTAGCCTGTTTAGCCTCTCTGCTGAATTAATAGGCATCA
TATGACATGGTTTATTCATTCCTTTGTATACTTATTAGGTCAGTATACTTTTTCCACGAA
ATATGTTTATATCTCTAATATCATCTACAGTTATTGAGCTGTAATGTATGACATTTTCCC
CAATACAGTTTTTTATACATTTTAATTATTTAACATTTTAAGAGCACTCCCAAATTTTTG
CTCTTCAATTATGTTTAAAGATTGTAAATAACTAATCAACTGTAAATGATCATGTTGTGT
TAACAAGATGATTTATTGAAAGCAAACTTAGGCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCAAAACAGTTCCCAAACTAGATTTGCCTGTACTTTCTCACATTGAAAAAAGTTTTGAT
CCCAAGTTCAAGTCTTGTTTTCAATTCAGTATTTTCTTGTTTTAAATATTTTAAATTCAA
ATTTTGTTGAAAATATTTTCACGTTTACTTAGAAATTTGAAATTGTAGATGGGCTGATTC
GGTTTGCCTCATTTTAATTGCCTAGCCTGTTTAGCCTCTCTGCTGAATTAATAGGCATCA
TATGACATGGTTTATTCATTCCTTTGTATACTTATTAGGTCAGTATACTTTTTCCACGAA
ATATGTTTATATCTCTAATATCATCTACAGTTATTGAGCTGTAATGTATGACATTTTCCC
CAATACAGTTTTTTATACATTTTAATTATTTAACATTTTAAGAGCACTCCCAAATTTTTG
CTCTTCAATTATGTTTAAAGATTGTAAATAACTAATCAACTGTAAATGATCATGTTGTGT
TAACAAGATGATTTATTGAAAGCAAACTTAGGCTTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               17-513, gnl|bosTau2|chr14 (43748093-43748586)
               

               
               17-513, gnl|Hg17|chr8 (94898189-94898645)
               

               
               17-513, gnl|Mm7|chr4 (11966643-11966210)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-513, gnl|bosTau2|chr14 (43748093-43748586)
               

               
               17-513, gnl|Hg17|chr8 (94898189-94898645)
               

               
               17-513, gnl|Mm7|chr4 (11966643-11966210)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ret (0.257467)
               

               
               tra (0.246184)
               

               
               fco (0.157208)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.257467)
               

               
               tra (0.246184)
               

               
               fco (0.157208)

	17-513, gnl\|bosTau2\|chr14 (43748093-43748586)
	17-513, gnl\|Hg17\|chr8 (94898189-94898645)
	17-513, gnl\|Mm7\|chr4 (11966643-11966210)