Non-Coding RNA Search

Ss1.1-rtra20_f5.5

Sequence:


               
               GTCTGACAACGCAGTTTGCAAGGCCTGGTCTGGGGCTGACCCAGAAAGGGGCGTCAGCTG
TCGTCCCCATGGGGCTGTGTTTTCCCTGTCCAACGGAGGAGGCGCCTCCCTCGCCAGACC
CGGAAGAAAAAAGAGCAAAGCTTGCAGAGGCTGCAGAGAGAAGACAGAAGGAGGCTGCAT
CTCGGGGCATTTTGGATGTTAGGTCTGTGGAAGAAAAAAGAAAGAAAAAGGAAAAAATAG
AAAAACAAATGGCTACATCTGGACCCCCACCAGAAGGTGGACTTAGATGGACAGTTTCAT
AAAGTATAACATAAGTGGAAGAGTCTACTGCCAATAATTAATACCTGCAATCAAGTGGAA
ATCCTCAATTTAATCTCTTCTCTTTGAATAAATGAAGATTCAGACTTTGTAATTTTAGTG
CCCTTAAGTGCAGTGCTTTTTCAGAATTGAATATCGAAAATACTTTTGATTTTTAGACTT
AGAAAATGGCCAGACCTTTCACTAAGTACTTATTTTCTCTACATTTGTTCTTCTGCAGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTGACAACGCAGTTTGCAAGGCCTGGTCTGGGGCTGACCCAGAAAGGGGCGTCAGCTG
TCGTCCCCATGGGGCTGTGTTTTCCCTGTCCAACGGAGGAGGCGCCTCCCTCGCCAGACC
CGGAAGAAAAAAGAGCAAAGCTTGCAGAGGCTGCAGAGAGAAGACAGAAGGAGGCTGCAT
CTCGGGGCATTTTGGATGTTAGGTCTGTGGAAGAAAAAAGAAAGAAAAAGGAAAAAATAG
AAAAACAAATGGCTACATCTGGACCCCCACCAGAAGGTGGACTTAGATGGACAGTTTCAT
AAAGTATAACATAAGTGGAAGAGTCTACTGCCAATAATTAATACCTGCAATCAAGTGGAA
ATCCTCAATTTAATCTCTTCTCTTTGAATAAATGAAGATTCAGACTTTGTAATTTTAGTG
CCCTTAAGTGCAGTGCTTTTTCAGAATTGAATATCGAAAATACTTTTGATTTTTAGACTT
AGAAAATGGCCAGACCTTTCACTAAGTACTTATTTTCTCTACATTTGTTCTTCTGCAGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5R6N0_PONPY

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5R6N0_PONPY

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               10-538, gnl|bosTau2|chr2 (14104690-14104170)
               

               
               10-538, gnl|Hg17|chr11 (22807930-22801021)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-538, gnl|bosTau2|chr2 (14104690-14104170)
               

               
               10-538, gnl|Hg17|chr11 (22807930-22801021)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lun (0.150489)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)
               

               
               tra (0.123092)

	10-538, gnl\|bosTau2\|chr2 (14104690-14104170)
	10-538, gnl\|Hg17\|chr11 (22807930-22801021)