Non-Coding RNA Search

Ss1.1-rtra21_o16.5

Sequence:


               
               ATTTTAAAGTTATTTCCTGTAATTTATTTTCAGTACATAATTAAAAATTTGTTGTATATA
TAAAATGGAACTTGTGATTCTTTTTTAAGGAATTCGTTAACATGTATTCCGTTACATAAA
TCATATTTGTTGATACTGAAAAGAGCATGAGTGGGAAACGCCCAAGTGAGAGCTCTAAGG
TATTGTACCTCAAAGCTGAGCTTCTAAAGTTATTTTTCTGTGTCTGTCTCTGCTGTGATT
AGCCTAGGGGATGTGTGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTATATA
AGGCTAACATTTTGCAATACTTTCGTAGCCTTCTTTGTGAACACCTATTAAAGCTCCTAG
TTTGGTTTTTAAGTGAAGAGAATTCAGATGTTGAGTTGCATGCCCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTAAAGTTATTTCCTGTAATTTATTTTCAGTACATAATTAAAAATTTGTTGTATATA
TAAAATGGAACTTGTGATTCTTTTTTAAGGAATTCGTTAACATGTATTCCGTTACATAAA
TCATATTTGTTGATACTGAAAAGAGCATGAGTGGGAAACGCCCAAGTGAGAGCTCTAAGG
TATTGTACCTCAAAGCTGAGCTTCTAAAGTTATTTTTCTGTGTCTGTCTCTGCTGTGATT
AGCCTAGGGGATGTGTGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTATATA
AGGCTAACATTTTGCAATACTTTCGTAGCCTTCTTTGTGAACACCTATTAAAGCTCCTAG
TTTGGTTTTTAAGTGAAGAGAATTCAGATGTTGAGTTGCATGCCCAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-408, gnl|bosTau2|chr11 (16441232-16441643)
               

               
               1-408, gnl|Hg17|chr2 (38433742-38433007)
               

               
               1-408, gnl|Mm7|chr17 (78144840-78144323)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-408, gnl|bosTau2|chr11 (16441232-16441643)
               

               
               1-408, gnl|Hg17|chr2 (38433742-38433007)
               

               
               1-408, gnl|Mm7|chr17 (78144840-78144323)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               tra (0.246184)
               

               
               mgp (0.230681)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.246184)
               

               
               mgp (0.230681)

	1-408, gnl\|bosTau2\|chr11 (16441232-16441643)
	1-408, gnl\|Hg17\|chr2 (38433742-38433007)
	1-408, gnl\|Mm7\|chr17 (78144840-78144323)