Non-Coding RNA Search

Ss1.1-rtra28_e21.5

Sequence:


               
               TCCCGGGTCGACCCACGCGTCCCGATGGTTATTTTTATAATATCAATAATAAACAAGGAC
TCTTGTAACCAGGGGGTGCCTAAGTGTGTCATCAGAGAACACTAACTCTGGCAAAGGATT
CTGGGTGGTCTCAAGATGCCTGCTGCCTCTTGACATGGTTAGTGTCCTGGGTTTAAGTTA
CTTTCTACCTAGTTATTAAGATTACTATTTGATACACTCAATATTGCCTGATTCCAATAA
CTTTGCTTAAAATTTTTCTGTATTTTAACTTGTCTAGGGTTTTCTACTTCTTATATTTTT
ATAATATTTTCTCATTTTTTAGATTAAAAAACATTATATTTACCCACATGTGCCAAGATA
AGCCATTTAGGTCTCCCTAGGGGTCAGCTCTTTGGTGTCATTACCTGCCATATGTGTTTT
GTGCAGCAGCGAGAGGCGTGCTGTCCATCACTGCTCTTTCCTTGTTCCTGTCCAAACAAA
TAATTGATAGGTTAATTCAATAGAGAAAATCAATAAGGAATGACATGCATGGCCCAAAGC
ATATGCAATCAAAATTGTTTGACCATTTATCCAATTATTGAAACCAATTAAGATTATCCA
TTTTAAATTTGATATATGCTCGCTTCCGGAATGTGTTATGCATTGATGCTAAGTGAATGG
GACCAAGTAAATCTACTGAGTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCGGGTCGACCCACGCGTCCCGATGGTTATTTTTATAATATCAATAATAAACAAGGAC
TCTTGTAACCAGGGGGTGCCTAAGTGTGTCATCAGAGAACACTAACTCTGGCAAAGGATT
CTGGGTGGTCTCAAGATGCCTGCTGCCTCTTGACATGGTTAGTGTCCTGGGTTTAAGTTA
CTTTCTACCTAGTTATTAAGATTACTATTTGATACACTCAATATTGCCTGATTCCAATAA
CTTTGCTTAAAATTTTTCTGTATTTTAACTTGTCTAGGGTTTTCTACTTCTTATATTTTT
ATAATATTTTCTCATTTTTTAGATTAAAAAACATTATATTTACCCACATGTGCCAAGATA
AGCCATTTAGGTCTCCCTAGGGGTCAGCTCTTTGGTGTCATTACCTGCCATATGTGTTTT
GTGCAGCAGCGAGAGGCGTGCTGTCCATCACTGCTCTTTCCTTGTTCCTGTCCAAACAAA
TAATTGATAGGTTAATTCAATAGAGAAAATCAATAAGGAATGACATGCATGGCCCAAAGC
ATATGCAATCAAAATTGTTTGACCATTTATCCAATTATTGAAACCAATTAAGATTATCCA
TTTTAAATTTGATATATGCTCGCTTCCGGAATGTGTTATGCATTGATGCTAAGTGAATGG
GACCAAGTAAATCTACTGAGTATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               25-672, gnl|bosTau2|chr13 (52381638-52382298)
               

               
               25-672, gnl|Hg17|chr8 (69893136-69893796)
               

               
               25-672, gnl|Mm7|chr1 (12117798-12118357)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-672, gnl|bosTau2|chr13 (52381638-52382298)
               

               
               25-672, gnl|Hg17|chr8 (69893136-69893796)
               

               
               25-672, gnl|Mm7|chr1 (12117798-12118357)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	25-672, gnl\|bosTau2\|chr13 (52381638-52382298)
	25-672, gnl\|Hg17\|chr8 (69893136-69893796)
	25-672, gnl\|Mm7\|chr1 (12117798-12118357)