Non-Coding RNA Search

Ss1.1-rtra28_h23.5

Sequence:


               
               ATTTTCTTGCAATAAAGGCAAAAAGAACTGGAACTTTAAAATTCAAATGGTAATAGTAAA
GAAAAAAAATGGAAGGTTGAATTTTATGGGCTATGAATGGCCCAAAGCTTTGAATCTTTG
AGGATGAAAAAAATGCCAATGCTATGCTTTATGAATTTAAAAATAAGAATGATTAATGGT
TCAGGTGGAATGGACAAGCAAACTTTTTGTTTTTTCTGCACATTTTGTGTGGACAGTCTT
ATTGTCAATGCTGCTGTGAACTGAGGTATGTCATTTGTGCTCAAAGTTTAATTATTATTC
TTGGGATATTTTAAAAATGCTACTGATATTCAGCTGTAAATATGATTAGTGCATCTGTTG
AGTTTGGTTTCTTTTATAGCATTAATCCTTTATAAATTTCAATACCATGATAGAAATATG
TTTCTTGTGGCAAGTAAGAATTCACCGGTGTAAAAAAAAATAGGAAAAAAATTCATTTTA
TTTTTATTGATGTATACTGGTAGTTGGCATAAATTAGTAGCAAAAAGCATGTCTAAGGGT
AAGTGGTTTAAGTTGCCTCAGAAGTGGGACAATGTAGCTTTATTTTACAAGAAAGTATAG
CTAGATTTTTATGAACTATTTATTCTGTACAGTTTTGTATATTTTTGGTTCACAAAGGTA
ATTATTCTTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTCTTGCAATAAAGGCAAAAAGAACTGGAACTTTAAAATTCAAATGGTAATAGTAAA
GAAAAAAAATGGAAGGTTGAATTTTATGGGCTATGAATGGCCCAAAGCTTTGAATCTTTG
AGGATGAAAAAAATGCCAATGCTATGCTTTATGAATTTAAAAATAAGAATGATTAATGGT
TCAGGTGGAATGGACAAGCAAACTTTTTGTTTTTTCTGCACATTTTGTGTGGACAGTCTT
ATTGTCAATGCTGCTGTGAACTGAGGTATGTCATTTGTGCTCAAAGTTTAATTATTATTC
TTGGGATATTTTAAAAATGCTACTGATATTCAGCTGTAAATATGATTAGTGCATCTGTTG
AGTTTGGTTTCTTTTATAGCATTAATCCTTTATAAATTTCAATACCATGATAGAAATATG
TTTCTTGTGGCAAGTAAGAATTCACCGGTGTAAAAAAAAATAGGAAAAAAATTCATTTTA
TTTTTATTGATGTATACTGGTAGTTGGCATAAATTAGTAGCAAAAAGCATGTCTAAGGGT
AAGTGGTTTAAGTTGCCTCAGAAGTGGGACAATGTAGCTTTATTTTACAAGAAAGTATAG
CTAGATTTTTATGAACTATTTATTCTGTACAGTTTTGTATATTTTTGGTTCACAAAGGTA
ATTATTCTTGGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               2-672, gnl|bosTau2|chr29 (15333604-15332938)
               

               
               2-672, gnl|Hg17|chr13 (85265644-85264980)
               

               
               2-672, gnl|Mm7|chr14 (105151187-105150533)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-672, gnl|bosTau2|chr29 (15333604-15332938)
               

               
               2-672, gnl|Hg17|chr13 (85265644-85264980)
               

               
               2-672, gnl|Mm7|chr14 (105151187-105150533)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tra (0.246184)
               

               
               sag (0.182715)
               

               
               ret (0.128733)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.246184)
               

               
               sag (0.182715)
               

               
               ret (0.128733)

	2-672, gnl\|bosTau2\|chr29 (15333604-15332938)
	2-672, gnl\|Hg17\|chr13 (85265644-85264980)
	2-672, gnl\|Mm7\|chr14 (105151187-105150533)